RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ICA1Q05084 483 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 SEPT2Q15019 361 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 LBX2Q6XYB7 198 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 ANKLE1Q8NAG6 615 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 ACER1Q8TDN7 264 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 TRIB2Q92519 343 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 DPF3Q92784 378 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 PORCNQ9H237 461 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 RPAP3Q9H6T3 665 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-205ENST00000558700 ARHGEF10LQ9HCE6 1279 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 HMX1Q9NP08 348 aaPredicted RBP9.69□□□□□ -0.86
TRAF3-205ENST00000558700 ECHDC1Q9NTX5 307 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 RBPJLQ9UBG7 517 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 GJD2Q9UKL4 321 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 IVNS1ABPQ9Y6Y0 642 aa9.69□□□□□ -0.86
TRAF3-205ENST00000558700 RLFQ13129 1914 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 RAD21O60216 631 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 CYP2D6P10635 497 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
TRAF3-205ENST00000558700 CYP2B6P20813 491 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 SKIV2LQ15477 1246 aaKnown RBP9.68□□□□□ -0.86
TRAF3-205ENST00000558700 MAP3K21Q5TCX8 1036 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 WDR78Q5VTH9 848 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 LPAR1Q92633 364 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 TANGO6Q9C0B7 1094 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
TRAF3-205ENST00000558700 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
TRAF3-205ENST00000558700 ROBO3Q96MS0 1386 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 PRKAB2O43741 272 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-205ENST00000558700 PEX10O60683 326 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-205ENST00000558700 EVX2Q03828 476 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 MCM6Q14566 821 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 LRRFIP1Q32MZ4 808 aaKnown RBP9.67□□□□□ -0.86
TRAF3-205ENST00000558700 MORN1Q5T089 497 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 C16orf86Q6ZW13 317 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 NECAB2Q7Z6G3 386 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 KBTBD3Q8NAB2 608 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 DYNLL2Q96FJ2 89 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
TRAF3-205ENST00000558700 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-205ENST00000558700 SLC4A4Q9Y6R1 1079 aa9.67□□□□□ -0.86
TRAF3-205ENST00000558700 COL11A1P12107 1806 aaPredicted RBP9.66□□□□□ -0.86
TRAF3-205ENST00000558700 SLC15A5A6NIM6 579 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 USP17L21D6R901 530 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 WDR46O15213 610 aaKnown RBP9.66□□□□□ -0.86
TRAF3-205ENST00000558700 CNMDO75829 334 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 ZFYP08048 801 aaPredicted RBP9.66□□□□□ -0.86
TRAF3-205ENST00000558700 AKR1B1P15121 316 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 TRIM32Q13049 653 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 Q3C1V9 767 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 MFSD14CQ5VZR4 134 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 MB21D1Q8N884 522 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 APPBP2Q92624 585 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 USP6NLQ92738 828 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 PAWRQ96IZ0 340 aaKnown RBP9.66□□□□□ -0.86
TRAF3-205ENST00000558700 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 TMX2Q9Y320 296 aa9.66□□□□□ -0.86
TRAF3-205ENST00000558700 TTC41PQ6P2S7 1318 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 MYH4Q9Y623 1939 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CYP2D7A0A087X1C5 515 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 A0A1W2PRG0 241 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 ERC2O15083 957 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 FLOT1O75955 427 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CHGBP05060 677 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 PTPREP23469 700 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CDK8P49336 464 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 GRB14Q14449 540 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 COG2Q14746 738 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 GIMAP6Q6P9H5 292 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CLEC10AQ8IUN9 316 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 DIS3LQ8TF46 1054 aaKnown RBP9.65□□□□□ -0.86
TRAF3-205ENST00000558700 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
TRAF3-205ENST00000558700 VCPKMTQ9H867 229 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 HOXC10Q9NYD6 342 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 BTBD7Q9P203 1132 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 OGDHLQ9ULD0 1010 aa9.65□□□□□ -0.86
TRAF3-205ENST00000558700 TRIOBPQ9H2D6 2365 aa9.65□□□□□ -0.87
TRAF3-205ENST00000558700 MSCO60682 206 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 OATP04181 439 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 HOXC6P09630 235 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 GNAT2P19087 354 aa9.64□□□□□ -0.87
TRAF3-205ENST00000558700 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAF3-205ENST00000558700 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms