RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 GRB14Q14449 540 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 ALX1Q15699 326 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 VPS53Q5VIR6 699 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 NEDD1Q8NHV4 660 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 MTMR4Q9NYA4 1195 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 CLIP2Q9UDT6 1046 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 TRIOBPQ9H2D6 2365 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 PLIN4Q96Q06 1357 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 F5H6K3 240 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
CSHL1-208ENST00000558609 KLRC3Q07444 240 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 CCL14Q16627 93 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 CHRDL2Q6WN34 429 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 CEP95Q96GE4 821 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 FBXO28Q9NVF7 368 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
CSHL1-208ENST00000558609 PARP14Q460N5 1801 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 CEP290O15078 2479 aa18.43■□□□□ 0.54
CSHL1-208ENST00000558609 RAD21O60216 631 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 FARP2O94887 1054 aaPredicted RBP18.42■□□□□ 0.54
CSHL1-208ENST00000558609 TTLL1O95922 423 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 ERCC3P19447 782 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 TFAP4Q01664 338 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 CACNB2Q08289 660 aaPredicted RBP18.42■□□□□ 0.54
CSHL1-208ENST00000558609 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 MROH8Q9H579 483 aa18.42■□□□□ 0.54
CSHL1-208ENST00000558609 VWA5AO00534 786 aa18.41■□□□□ 0.54
CSHL1-208ENST00000558609 NDUFB10O96000 172 aa18.41■□□□□ 0.54
CSHL1-208ENST00000558609 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
CSHL1-208ENST00000558609 PLS1Q14651 629 aa18.41■□□□□ 0.54
CSHL1-208ENST00000558609 FAM47AQ5JRC9 791 aa18.41■□□□□ 0.54
CSHL1-208ENST00000558609 RBM27Q9P2N5 1060 aaKnown RBP18.41■□□□□ 0.54
CSHL1-208ENST00000558609 SLC25A27O95847 323 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 IGHA2P01877 340 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 FGAP02671 866 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 SDSP20132 328 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 MFSD14CQ5VZR4 134 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
CSHL1-208ENST00000558609 ZNF589Q86UQ0 364 aaPredicted RBP18.4■□□□□ 0.54
CSHL1-208ENST00000558609 ABRAQ8N0Z2 381 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 GMCL1P1Q8NEA9 526 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 NUP88Q99567 741 aaPredicted RBP18.4■□□□□ 0.54
CSHL1-208ENST00000558609 SLF1Q9BQI6 1058 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 HTATIP2Q9BUP3 242 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 FLRT1Q9NZU1 646 aa18.4■□□□□ 0.54
CSHL1-208ENST00000558609 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 FGRP09769 529 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
CSHL1-208ENST00000558609 ADORA2AP29274 412 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 DPP9Q86TI2 863 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 NCAPG2Q86XI2 1143 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 RIOX2Q8IUF8 465 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 INCENPQ9NQS7 918 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 OGDHLQ9ULD0 1010 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 CCDC171Q6TFL3 1326 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 ZNF236Q9UL36 1845 aa18.39■□□□□ 0.53
CSHL1-208ENST00000558609 ORC4O43929 436 aa18.38■□□□□ 0.53
CSHL1-208ENST00000558609 CCND3P30281 292 aaPredicted RBP18.38■□□□□ 0.53
CSHL1-208ENST00000558609 STAT3P40763 770 aa18.38■□□□□ 0.53
CSHL1-208ENST00000558609 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
CSHL1-208ENST00000558609 DPF3Q92784 378 aa18.38■□□□□ 0.53
CSHL1-208ENST00000558609 PRO3102Q9H379 93 aa18.38■□□□□ 0.53
CSHL1-208ENST00000558609 ZNF214Q9UL59 606 aaPredicted RBP18.38■□□□□ 0.53
CSHL1-208ENST00000558609 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
CSHL1-208ENST00000558609 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 COBLO75128 1261 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 FCER1AP12319 257 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 COPB2P35606 906 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
CSHL1-208ENST00000558609 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
CSHL1-208ENST00000558609 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
CSHL1-208ENST00000558609 PAWRQ96IZ0 340 aaKnown RBP18.37■□□□□ 0.53
CSHL1-208ENST00000558609 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 SLC5A4Q9NY91 659 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 FEM1BQ9UK73 627 aa18.37■□□□□ 0.53
CSHL1-208ENST00000558609 HIP1O00291 1037 aa18.36■□□□□ 0.53
CSHL1-208ENST00000558609 NOVP48745 357 aa18.36■□□□□ 0.53
CSHL1-208ENST00000558609 MNX1P50219 401 aaPredicted RBP18.36■□□□□ 0.53
CSHL1-208ENST00000558609 SLFN13Q68D06 897 aa18.36■□□□□ 0.53
CSHL1-208ENST00000558609 LHX8Q68G74 356 aa18.36■□□□□ 0.53
CSHL1-208ENST00000558609 NECAB2Q7Z6G3 386 aa18.36■□□□□ 0.53
CSHL1-208ENST00000558609 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms