RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 OTOP1Q7RTM1 612 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 RALYLQ86SE5 291 aaKnown RBP14.7□□□□□ -0.06
LRRC28-206ENST00000558471 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 ENAHQ8N8S7 591 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-206ENST00000558471 GPRC5AQ8NFJ5 357 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 GTF3C2Q8WUA4 911 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-206ENST00000558471 PAGR1Q9BTK6 254 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 MTMR7Q9Y216 660 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 TRIM17Q9Y577 477 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 GTF3C3Q9Y5Q9 886 aa14.7□□□□□ -0.06
LRRC28-206ENST00000558471 TNKSO95271 1327 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 BMP3P12645 472 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 SLC1A4P43007 532 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-206ENST00000558471 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-206ENST00000558471 RASGRP2Q7LDG7 609 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 CHST3Q7LGC8 479 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-206ENST00000558471 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 GMCL1Q96IK5 515 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 TRIM47Q96LD4 638 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 UBAC1Q9BSL1 405 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 EFCC1Q9HA90 598 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 BTBD7Q9P203 1132 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 RABGAP1Q9Y3P9 1069 aa14.69□□□□□ -0.06
LRRC28-206ENST00000558471 MYPNQ86TC9 1320 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
LRRC28-206ENST00000558471 HSPA4P34932 840 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 ANTXR2P58335 489 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 ERVK-9P63128 1117 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 ERVK-24P63145 666 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 SEC23AQ15436 765 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 TSGA10IPQ3SY00 556 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 PPP1R9AQ9ULJ8 1098 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 A0A0G2JMZ2 1700 aa14.68□□□□□ -0.06
LRRC28-206ENST00000558471 TMEM232C9JQI7 657 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 IFIT3O14879 490 aaKnown RBP14.67□□□□□ -0.06
LRRC28-206ENST00000558471 FCGRTP55899 365 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 KCTD1Q719H9 257 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 PRPF38AQ8NAV1 312 aaKnown RBP14.67□□□□□ -0.06
LRRC28-206ENST00000558471 DCAF4Q8WV16 495 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 KCNB2Q92953 911 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 SLF1Q9BQI6 1058 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 USP26Q9BXU7 913 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 MCOLN1Q9GZU1 580 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 FEM1BQ9UK73 627 aa14.67□□□□□ -0.06
LRRC28-206ENST00000558471 ISY1Q9ULR0 285 aaKnown RBP14.67□□□□□ -0.06
LRRC28-206ENST00000558471 VWA5AO00534 786 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
LRRC28-206ENST00000558471 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
LRRC28-206ENST00000558471 GNRH1P01148 92 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 PDHBP11177 359 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
LRRC28-206ENST00000558471 MCM5P33992 734 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
LRRC28-206ENST00000558471 ADCK5Q3MIX3 580 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
LRRC28-206ENST00000558471 TNS4Q8IZW8 715 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 MB21D1Q8N884 522 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 IGDCC4Q8TDY8 1250 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 KIFC2Q96AC6 838 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 NEK1Q96PY6 1258 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 PORCNQ9H237 461 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 SENP2Q9HC62 589 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
LRRC28-206ENST00000558471 ERICH2A1L162 156 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 PRC1O43663 620 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 PLA2G6O60733 806 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 SNHG28P0DPA3 235 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 HOXD10P28358 340 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 STAT2P52630 851 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 TMEM132BQ14DG7 1078 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 CCDC96Q2M329 555 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 TTBK2Q6IQ55 1244 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 REPS2Q8NFH8 660 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 CHURC1Q8WUH1 139 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 SPATC1LQ9H0A9 340 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 GPCPD1Q9NPB8 672 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 GPHNQ9NQX3 736 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-206ENST00000558471 SRRDQ9UH36 339 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 GABRQQ9UN88 632 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 SNX14Q9Y5W7 946 aa14.65□□□□□ -0.06
LRRC28-206ENST00000558471 FRMPD2Q68DX3 1309 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-206ENST00000558471 PLXNB2O15031 1838 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 SLC16A2P36021 539 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 CCNA1P78396 465 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 IKQ13123 557 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 KRT32Q14532 448 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 PLS1Q14651 629 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 WTAPQ15007 396 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 SART3Q15020 963 aaKnown RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 TMEM67Q5HYA8 995 aa14.64□□□□□ -0.07
LRRC28-206ENST00000558471 FBXO46Q6PJ61 603 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-206ENST00000558471 FAM160B2Q86V87 743 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms