RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZFYP08048 801 aaPredicted RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 FCER1AP12319 257 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 RASA1P20936 1047 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 MAGEA10P43363 369 aaPredicted RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 LRRC26Q2I0M4 334 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 LRRFIP1Q32MZ4 808 aaKnown RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 GJC2Q5T442 439 aaPredicted RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 MMP19Q99542 508 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 EPB41L4AQ9HCS5 686 aaPredicted RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 CLIP2Q9UDT6 1046 aa18.57■□□□□ 0.56
TPM1-211ENST00000558314 CTDP1Q9Y5B0 961 aaPredicted RBP18.57■□□□□ 0.56
TPM1-211ENST00000558314 PGK2P07205 417 aa18.56■□□□□ 0.56
TPM1-211ENST00000558314 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
TPM1-211ENST00000558314 ZNF444Q8N0Y2 327 aaPredicted RBP18.56■□□□□ 0.56
TPM1-211ENST00000558314 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
TPM1-211ENST00000558314 SEC62Q99442 399 aaKnown RBP18.56■□□□□ 0.56
TPM1-211ENST00000558314 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
TPM1-211ENST00000558314 SOX1O00570 391 aaPredicted RBP18.55■□□□□ 0.56
TPM1-211ENST00000558314 MSCO60682 206 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 SLC25A27O95847 323 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 COL6A1P12109 1028 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 CYBAP13498 195 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 GNAT2P19087 354 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 STAT3P40763 770 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
TPM1-211ENST00000558314 MDM2Q00987 491 aaPredicted RBP18.55■□□□□ 0.56
TPM1-211ENST00000558314 KCTD2Q14681 263 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 UBE2OQ9C0C9 1292 aaKnown RBP18.55■□□□□ 0.56
TPM1-211ENST00000558314 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
TPM1-211ENST00000558314 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
TPM1-211ENST00000558314 VWA5AO00534 786 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 OLFML2BQ68BL8 750 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 GIMAP6Q6P9H5 292 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 GDF15Q99988 308 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
TPM1-211ENST00000558314 KBTBD13C9JR72 458 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 F5H6K3 240 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 NDUFB10O96000 172 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 MX1P20591 662 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 KLRC3Q07444 240 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 CPXCR1Q8N123 301 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
TPM1-211ENST00000558314 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 KIFC2Q96AC6 838 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 MAML3Q96JK9 1138 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 NAPBQ9H115 298 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 ZNF287Q9HBT7 754 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 ATP11BQ9Y2G3 1177 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 RLFQ13129 1914 aa18.53■□□□□ 0.56
TPM1-211ENST00000558314 A0A0G2JMZ2 1700 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 A0A1W2PPC1 479 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 TSPY3P0CV98 308 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 TSPY8P0CW00 308 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 CCDC129Q6ZRS4 1044 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 RIOX2Q8IUF8 465 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 ABRAQ8N0Z2 381 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 ARRDC4Q8NCT1 418 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 NYAP2Q9P242 653 aa18.52■□□□□ 0.56
TPM1-211ENST00000558314 DNM1LO00429 736 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 SEPT4O43236 478 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
TPM1-211ENST00000558314 SNRNP48Q6IEG0 339 aaKnown RBP18.51■□□□□ 0.55
TPM1-211ENST00000558314 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 CEP95Q96GE4 821 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 PRKAG2Q9UGJ0 569 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 ROBO3Q96MS0 1386 aa18.51■□□□□ 0.55
TPM1-211ENST00000558314 ZBED4O75132 1171 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 BMP8BP34820 402 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 RTP1P59025 263 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 PDE4BQ07343 736 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 IKQ13123 557 aaPredicted RBP18.5■□□□□ 0.55
TPM1-211ENST00000558314 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 LBHD1Q9BQE6 289 aaPredicted RBP18.5■□□□□ 0.55
TPM1-211ENST00000558314 RAVER2Q9HCJ3 691 aaKnown RBP18.5■□□□□ 0.55
TPM1-211ENST00000558314 PRDM5Q9NQX1 630 aaPredicted RBP18.5■□□□□ 0.55
TPM1-211ENST00000558314 ADAMTS5Q9UNA0 930 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 MTMR7Q9Y216 660 aa18.5■□□□□ 0.55
TPM1-211ENST00000558314 RANBP2P49792 3224 aaKnown RBP18.49■□□□□ 0.55
TPM1-211ENST00000558314 FRMPD3Q5JV73 1810 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 TFAP4Q01664 338 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 PPARAQ07869 468 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 TEX13BQ9BXU2 312 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 ZNF214Q9UL59 606 aaPredicted RBP18.49■□□□□ 0.55
TPM1-211ENST00000558314 COL11A1P12107 1806 aaPredicted RBP18.49■□□□□ 0.55
TPM1-211ENST00000558314 ZNF236Q9UL36 1845 aa18.49■□□□□ 0.55
TPM1-211ENST00000558314 TTLL1O95922 423 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 TAL1P17542 331 aaPredicted RBP18.48■□□□□ 0.55
TPM1-211ENST00000558314 COPB2P35606 906 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 CTDSPL2Q05D32 466 aa18.48■□□□□ 0.55
TPM1-211ENST00000558314 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms