RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
TRPM1-206ENST00000558212 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
TRPM1-206ENST00000558212 KIAA2012Q0VF49 1180 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 SLC51AQ86UW1 340 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 GLIS3Q8NEA6 775 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 DPF2Q92785 391 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 SUV39H2Q9H5I1 410 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 NUP98P52948 1817 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 CUL9Q8IWT3 2517 aa8.58□□□□□ -1.04
TRPM1-206ENST00000558212 CEP290O15078 2479 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 TCERG1O14776 1098 aaKnown RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 RAD17O75943 681 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 EDN3P14138 238 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 NRLP54845 237 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 CTBSQ01459 385 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 DPP8Q6V1X1 898 aaPredicted RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 TRERF1Q96PN7 1200 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 AVENQ9NQS1 362 aaPredicted RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 KANSL3Q9P2N6 904 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 VTI1BQ9UEU0 232 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 LAMB4A4D0S4 1761 aa8.57□□□□□ -1.04
TRPM1-206ENST00000558212 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
TRPM1-206ENST00000558212 GPR25O00155 361 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 C2CD2LO14523 706 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 EIF4BP23588 611 aaKnown RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 FXR1P51114 621 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 FANCCQ00597 558 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 PLAURQ03405 335 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 GAS6Q14393 721 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 GRM2Q14416 872 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 ZNF468Q5VIY5 522 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 DLK2Q6UY11 383 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 RAB44Q7Z6P3 723 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 ZNF296Q8WUU4 475 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 BHMTQ93088 406 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 CNTNAP3BQ96NU0 1288 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 PNMA5Q96PV4 448 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 MDFIQ99750 246 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 HTTP42858 3142 aa8.56□□□□□ -1.04
TRPM1-206ENST00000558212 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-206ENST00000558212 MAP3K15Q6ZN16 1313 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 UBN2Q6ZU65 1347 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 TRIOBPQ9H2D6 2365 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 A0A1W2PP55 124 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 CDC14CA4D256 554 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 YDJCA8MPS7 323 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 PHF20L1A8MW92 1017 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 ADM5C9JUS6 153 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 NTSR2O95665 410 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 PSAPP07602 524 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 VSIG8P0DPA2 414 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
TRPM1-206ENST00000558212 RPS12P25398 132 aaKnown RBP8.55□□□□□ -1.04
TRPM1-206ENST00000558212 FKBP1BP68106 108 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 GPLD1P80108 840 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 FOXR1Q6PIV2 292 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 RASAL3Q86YV0 1011 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 SP8Q8IXZ3 490 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 CEP120Q8N960 986 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 BCO2Q9BYV7 579 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 LATS2Q9NRM7 1088 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
TRPM1-206ENST00000558212 NXF1Q9UBU9 619 aaKnown RBP8.55□□□□□ -1.04
TRPM1-206ENST00000558212 KIAA0100Q14667 2235 aaKnown RBP8.55□□□□□ -1.04
TRPM1-206ENST00000558212 ABCC4O15439 1325 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 PAPPA2Q9BXP8 1791 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 ZBTB42B2RXF5 422 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 U2SURPO15042 1029 aaKnown RBP8.54□□□□□ -1.04
TRPM1-206ENST00000558212 SIN3BO75182 1162 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 BBOX1O75936 387 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 GPTP24298 496 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
TRPM1-206ENST00000558212 TBC1D10BQ4KMP7 808 aaPredicted RBP8.54□□□□□ -1.04
TRPM1-206ENST00000558212 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 PPP1R42Q7Z4L9 355 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 TNFRSF25Q93038 417 aa8.54□□□□□ -1.04
TRPM1-206ENST00000558212 H3BM21 787 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 PSMD14O00487 310 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
TRPM1-206ENST00000558212 NXPE4Q6UWF7 544 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 TMEM87AQ8NBN3 555 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 RTF1Q92541 710 aaKnown RBP8.53□□□□□ -1.04
TRPM1-206ENST00000558212 TCF12Q99081 682 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
TRPM1-206ENST00000558212 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms