RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 FLOT1O75955 427 aa16.09■□□□□ 0.17
ALPK3-202ENST00000558077 TTLL1O95922 423 aa16.09■□□□□ 0.17
ALPK3-202ENST00000558077 MYCP01106 439 aaPredicted RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
ALPK3-202ENST00000558077 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
ALPK3-202ENST00000558077 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 MOV10L1Q9BXT6 1211 aaKnown RBP16.09■□□□□ 0.17
ALPK3-202ENST00000558077 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
ALPK3-202ENST00000558077 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
ALPK3-202ENST00000558077 TMEM132BQ14DG7 1078 aa16.08■□□□□ 0.16
ALPK3-202ENST00000558077 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
ALPK3-202ENST00000558077 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
ALPK3-202ENST00000558077 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
ALPK3-202ENST00000558077 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.16
ALPK3-202ENST00000558077 TSPY2A6NKD2 308 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 VWA5AO00534 786 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 IGHA2P01877 340 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 INHAP05111 366 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 XRCC5P13010 732 aaKnown RBP16.07■□□□□ 0.16
ALPK3-202ENST00000558077 CCL5P13501 91 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 CYP2B6P20813 491 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 PTPREP23469 700 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 CCNA1P78396 465 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 PTH1RQ03431 593 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 TRIM32Q13049 653 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 RCSD1Q6JBY9 416 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 TRIB2Q92519 343 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 NUDT12Q9BQG2 462 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 UNC93B1Q9H1C4 597 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 NEDD4P46934 1319 aa16.07■□□□□ 0.16
ALPK3-202ENST00000558077 RAD50Q92878 1312 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 RASGRP2Q7LDG7 609 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
ALPK3-202ENST00000558077 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
ALPK3-202ENST00000558077 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 SLC15A5A6NIM6 579 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 ZNF213O14771 459 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 SGSM2O43147 1006 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 RAD21O60216 631 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
ALPK3-202ENST00000558077 ERCC3P19447 782 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 MAP2K5Q13163 448 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 GRB14Q14449 540 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 CCL14Q16627 93 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
ALPK3-202ENST00000558077 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
ALPK3-202ENST00000558077 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
ALPK3-202ENST00000558077 GJB1P08034 283 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 HOXC6P09630 235 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 UBXN2AP68543 259 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
ALPK3-202ENST00000558077 RIOX2Q8IUF8 465 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 GMCL1Q96IK5 515 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 PAK6Q9NQU5 681 aaPredicted RBP16.04■□□□□ 0.16
ALPK3-202ENST00000558077 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
ALPK3-202ENST00000558077 COBLO75128 1261 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 HMGCRP04035 888 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 BMP3P12645 472 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 MCCP23508 829 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 STAT3P40763 770 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 RGS2P41220 211 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 GJA8P48165 433 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
ALPK3-202ENST00000558077 RNF208Q9H0X6 261 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 RNF41Q9H4P4 317 aaPredicted RBP16.03■□□□□ 0.16
ALPK3-202ENST00000558077 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 BIN2Q9UBW5 565 aaPredicted RBP16.03■□□□□ 0.16
ALPK3-202ENST00000558077 RIPK3Q9Y572 518 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
ALPK3-202ENST00000558077 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 STRNO43815 780 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 PLA2G6O60733 806 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 PLS1Q14651 629 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 UBE2Q1Q7Z7E8 422 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
ALPK3-202ENST00000558077 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 ANKS1AQ92625 1134 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 TTC14Q96N46 770 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 APBA2Q99767 749 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 MROH8Q9H579 483 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
ALPK3-202ENST00000558077 CTNNA3Q9UI47 895 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms