RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 PACS2Q86VP3 889 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 SUGP1Q8IWZ8 645 aaKnown RBP7.3□□□□□ -1.24
TRPM1-204ENST00000557948 TBC1D22AQ8WUA7 517 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 TOX2Q96NM4 488 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 MRIQ9BWK5 157 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 UPF3BQ9BZI7 483 aaKnown RBP7.3□□□□□ -1.24
TRPM1-204ENST00000557948 TMEM134Q9H6X4 195 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 UBE2ZQ9H832 354 aaPredicted RBP7.3□□□□□ -1.24
TRPM1-204ENST00000557948 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 TECTAO75443 2155 aa7.3□□□□□ -1.24
TRPM1-204ENST00000557948 ZNF536O15090 1300 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 COL4A6Q14031 1691 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 MYO15AQ9UKN7 3530 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
TRPM1-204ENST00000557948 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 ANKRD18BA2A2Z9 1011 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 RRP9O43818 475 aaKnown RBP7.29□□□□□ -1.24
TRPM1-204ENST00000557948 FRAT2O75474 233 aaPredicted RBP7.29□□□□□ -1.24
TRPM1-204ENST00000557948 FGBP02675 491 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 KCNA5P22460 613 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 GYG1P46976 350 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 HERVK_113P62684 666 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 WDR78Q5VTH9 848 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 ASCL5Q7RTU5 278 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.29□□□□□ -1.24
TRPM1-204ENST00000557948 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 PAGR1Q9BTK6 254 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 METTL22Q9BUU2 404 aaPredicted RBP7.29□□□□□ -1.24
TRPM1-204ENST00000557948 IL23AQ9NPF7 189 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 TBX21Q9UL17 535 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 NDUFB9Q9Y6M9 179 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 ATAD5Q96QE3 1844 aa7.29□□□□□ -1.24
TRPM1-204ENST00000557948 SMCHD1A6NHR9 2005 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 PRR23AA6NEV1 266 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 MOXD2PA6NHM9 499 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 EPOPA6NHQ4 379 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 PROB1E7EW31 1015 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 CA3P07451 260 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 HOXB7P09629 217 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 NDUFV2P19404 249 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 RFC5P40937 340 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 NFIAQ12857 509 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 Q3C1V9 767 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 PUS10Q3MIT2 529 aaKnown RBP7.28□□□□□ -1.24
TRPM1-204ENST00000557948 TMEM67Q5HYA8 995 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 FAM47AQ5JRC9 791 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 OTOP2Q7RTS6 562 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 UBE3BQ7Z3V4 1068 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 RNF180Q86T96 592 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 ARNTL2Q8WYA1 636 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 ZBED2Q9BTP6 218 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 RBPJLQ9UBG7 517 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
TRPM1-204ENST00000557948 IVNS1ABPQ9Y6Y0 642 aa7.28□□□□□ -1.24
TRPM1-204ENST00000557948 COL4A4P53420 1690 aaPredicted RBP7.28□□□□□ -1.24
TRPM1-204ENST00000557948 MAP1BP46821 2468 aaKnown RBP7.27□□□□□ -1.24
TRPM1-204ENST00000557948 GVINP1Q7Z2Y8 2422 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 A6NJR5 290 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 DDX58O95786 925 aaKnown RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 HOXC6P09630 235 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 ATP2A2P16615 1042 aaKnown RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 CCNA1P78396 465 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 DDX10Q13206 875 aaKnown RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 ST3GAL2Q16842 350 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 GTF3C2Q8WUA4 911 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 PPP1R12CQ9BZL4 782 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 PHAXQ9H814 394 aaKnown RBP7.27□□□□□ -1.25
TRPM1-204ENST00000557948 STARD7Q9NQZ5 370 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 SNRKQ9NRH2 765 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 TMOD4Q9NZQ9 345 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 FAM50BQ9Y247 325 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 MAPK8IP3Q9UPT6 1336 aa7.27□□□□□ -1.25
TRPM1-204ENST00000557948 WDR87Q6ZQQ6 2873 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 DMXL1Q9Y485 3027 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 FASNP49327 2511 aaKnown RBP7.26□□□□□ -1.25
TRPM1-204ENST00000557948 TMEM221A6NGB7 291 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 ZBBXA8MT70 800 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 M0R296 226 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 TRAK2O60296 914 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 RARBP10826 455 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
TRPM1-204ENST00000557948 HOXA7P31268 230 aaPredicted RBP7.26□□□□□ -1.25
TRPM1-204ENST00000557948 ZP2Q05996 745 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 NEXNQ0ZGT2 675 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 GRB10Q13322 594 aa7.26□□□□□ -1.25
TRPM1-204ENST00000557948 IFIT5Q13325 482 aaKnown RBP7.26□□□□□ -1.25
TRPM1-204ENST00000557948 DIXDC1Q155Q3 683 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms