RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
USP3-205ENST00000557884 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 DGKHQ86XP1 1220 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 ERO1AQ96HE7 468 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 RBPJLQ9UBG7 517 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 TMEM232C9JQI7 657 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 PRC1O43663 620 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 CNMDO75829 334 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 DSG3P32926 999 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 LACTBP83111 547 aaPredicted RBP16.83■□□□□ 0.28
USP3-205ENST00000557884 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
USP3-205ENST00000557884 SEC23AQ15436 765 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
USP3-205ENST00000557884 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 ANKS1AQ92625 1134 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 GMCL1Q96IK5 515 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 SENP2Q9HC62 589 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
USP3-205ENST00000557884 HOXC10Q9NYD6 342 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 PPP1R9AQ9ULJ8 1098 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 SNX14Q9Y5W7 946 aa16.83■□□□□ 0.28
USP3-205ENST00000557884 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
USP3-205ENST00000557884 ERICH2A1L162 156 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 CTGFP29279 349 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 MCM5P33992 734 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 PSMC4P43686 418 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 ERVK-24P63145 666 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 KIF22Q14807 665 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 SART3Q15020 963 aaKnown RBP16.82■□□□□ 0.28
USP3-205ENST00000557884 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 GTF3C2Q8WUA4 911 aaPredicted RBP16.82■□□□□ 0.28
USP3-205ENST00000557884 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 KCNB2Q92953 911 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
USP3-205ENST00000557884 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
USP3-205ENST00000557884 SEC24BO95487 1268 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 PDHBP11177 359 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 KRT32Q14532 448 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 WTAPQ15007 396 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 Q3C1V9 767 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 LBX2Q6XYB7 198 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
USP3-205ENST00000557884 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
USP3-205ENST00000557884 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
USP3-205ENST00000557884 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 CPA1P15085 419 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 PLS1Q14651 629 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 TTBK2Q6IQ55 1244 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 IGDCC4Q8TDY8 1250 aa16.8■□□□□ 0.28
USP3-205ENST00000557884 VWA5AO00534 786 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 SH2B2O14492 632 aaPredicted RBP16.79■□□□□ 0.28
USP3-205ENST00000557884 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
USP3-205ENST00000557884 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 SLC16A2P36021 539 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 STAT2P52630 851 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 FCGRTP55899 365 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 SNAP25P60880 206 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
USP3-205ENST00000557884 PRPF38AQ8NAV1 312 aaKnown RBP16.79■□□□□ 0.28
USP3-205ENST00000557884 CHURC1Q8WUH1 139 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 PORCNQ9H237 461 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
USP3-205ENST00000557884 TNPO2O14787 897 aaKnown RBP16.78■□□□□ 0.28
USP3-205ENST00000557884 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 TMEM132BQ14DG7 1078 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
USP3-205ENST00000557884 FAM160B2Q86V87 743 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 SPATC1LQ9H0A9 340 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
USP3-205ENST00000557884 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 CTDP1Q9Y5B0 961 aaPredicted RBP16.78■□□□□ 0.28
USP3-205ENST00000557884 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
USP3-205ENST00000557884 ZBED4O75132 1171 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms