RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 ATE1O95260 518 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 CPB1P15086 417 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 PTPRAP18433 802 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 DOC2BQ14184 412 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 PCSK7Q16549 785 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 C16orf71Q8IYS4 520 aaPredicted RBP6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 ST13P5Q8NFI4 369 aaPredicted RBP6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 CD2APQ9Y5K6 639 aa6.65□□□□□ -1.34
MTHFD1-216ENST00000557539 PDGFRBP09619 1106 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 ESRRAP11474 423 aaPredicted RBP6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 GUCY2CP25092 1073 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 CDK8P49336 464 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 ZNF252P-AS1Q0IIN9 211 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 DALRD3Q5D0E6 543 aaKnown RBP6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 FAM35AQ86V20 835 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 DDX54Q8TDD1 881 aaKnown RBP6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 TM9SF2Q99805 663 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 MTFR1LQ9H019 292 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 NCOA2Q15596 1464 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 ARHGAP35Q9NRY4 1499 aa6.64□□□□□ -1.35
MTHFD1-216ENST00000557539 FAM177BA6PVY3 158 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 CNGA1P29973 690 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 GATA4P43694 442 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 IKBKEQ14164 716 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 XP32Q5T750 250 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 ZSWIM2Q8NEG5 633 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 ZC3H12CQ9C0D7 883 aaKnown RBP6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 SLC6A14Q9UN76 642 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 COL6A3P12111 3177 aa6.63□□□□□ -1.35
MTHFD1-216ENST00000557539 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 SAMD9LQ8IVG5 1584 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 UPK3BL1B0FP48 263 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 UPK3BL2E5RIL1 263 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 HTR3BO95264 441 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 VIL1P09327 827 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 FAM153BP0C7A2 387 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 PLA2G5P39877 138 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 VPS72Q15906 364 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 ELMSAN1Q6PJG2 1045 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 EEPD1Q7L9B9 569 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 PDZD3Q86UT5 571 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 FERMT3Q86UX7 667 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 JDP2Q8WYK2 163 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 ACSBG1Q96GR2 724 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 NAGPAQ9UK23 515 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 PCDHA4Q9UN74 947 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 CORINQ9Y5Q5 1042 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 CACNA1GO43497 2377 aa6.62□□□□□ -1.35
MTHFD1-216ENST00000557539 PZPP20742 1482 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 MEIS3P2A8K0S8 358 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 EIF5BO60841 1220 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 EVA1CP58658 441 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 AP3B2Q13367 1082 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 GRIK4Q16099 956 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 PRRT3Q5FWE3 981 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 WIPI1Q5MNZ9 446 aaPredicted RBP6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 SCARA3Q6AZY7 606 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 KRT26Q7Z3Y9 468 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 CERS3Q8IU89 383 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 NLGN2Q8NFZ4 835 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 ZNF669Q96BR6 464 aaPredicted RBP6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 FAM122AQ96E09 287 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 NMRK2Q9NPI5 230 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 HOMER2Q9NSB8 354 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 TYW1Q9NV66 732 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
MTHFD1-216ENST00000557539 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 FAM86C2PA6NEL3 165 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 CDC25BP30305 580 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 CABP4P57796 275 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 NCAPHQ15003 741 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 TMEM67Q5HYA8 995 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 HGSNATQ68CP4 663 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 UNC5AQ6ZN44 842 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
MTHFD1-216ENST00000557539 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms