RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 AKR1A1P14550 325 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 VCAM1P19320 739 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 ERCC3P19447 782 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 PHKA1P46020 1223 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 CCL23P55773 120 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.53
NEDD1-211ENST00000557454 ZGPATQ8N5A5 531 aaKnown RBP11.73□□□□□ -0.53
NEDD1-211ENST00000557454 KLHDC9Q8NEP7 349 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 FEZ1Q99689 392 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
NEDD1-211ENST00000557454 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 CHD8Q9HCK8 2581 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 PKD1L2Q7Z442 2459 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 SMCHD1A6NHR9 2005 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-211ENST00000557454 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-211ENST00000557454 ARVCFO00192 962 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 ZNF865P0CJ78 1059 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-211ENST00000557454 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-211ENST00000557454 CCSAPQ6IQ19 270 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-211ENST00000557454 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 ZNF384Q8TF68 577 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 GDPD5Q8WTR4 605 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 SPATC1LQ9H0A9 340 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 PI4KBQ9UBF8 816 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
NEDD1-211ENST00000557454 FAM186AA6NE01 2351 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.53
NEDD1-211ENST00000557454 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 NBPF7P0C2Y1 421 aaPredicted RBP11.71□□□□□ -0.53
NEDD1-211ENST00000557454 ZP2Q05996 745 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
NEDD1-211ENST00000557454 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 VWCEQ96DN2 955 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 WNT8AQ9H1J5 351 aa11.71□□□□□ -0.53
NEDD1-211ENST00000557454 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
NEDD1-211ENST00000557454 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
NEDD1-211ENST00000557454 DNAH14Q0VDD8 3507 aa11.71□□□□□ -0.54
NEDD1-211ENST00000557454 COL4A4P53420 1690 aaPredicted RBP11.71□□□□□ -0.54
NEDD1-211ENST00000557454 TECTAO75443 2155 aa11.71□□□□□ -0.54
NEDD1-211ENST00000557454 KMT2BQ9UMN6 2715 aaPredicted RBP11.7□□□□□ -0.54
NEDD1-211ENST00000557454 APAF1O14727 1248 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 SEMA3EO15041 775 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 CD4P01730 458 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 ASGR1P07306 291 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 MECOMQ03112 1051 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 TINF2Q9BSI4 451 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 GINM1Q9NU53 330 aa11.7□□□□□ -0.54
NEDD1-211ENST00000557454 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 RGS20O76081 388 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 GH2P01242 217 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 ID4P47928 161 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 RASGRF1Q13972 1273 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
NEDD1-211ENST00000557454 SCLYQ96I15 445 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 PRRX2Q99811 253 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 NOC4LQ9BVI4 516 aaKnown RBP11.69□□□□□ -0.54
NEDD1-211ENST00000557454 TRIM34Q9BYJ4 488 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 MUTYHQ9UIF7 546 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 CFAP47Q6ZTR5 3102 aa11.69□□□□□ -0.54
NEDD1-211ENST00000557454 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 H3BQ06 376 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 PGK2P07205 417 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 USP14P54578 494 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 PLS1Q14651 629 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 RPUSD2Q8IZ73 545 aaKnown RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 ATOH1Q92858 354 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 DHX36Q9H2U1 1008 aaKnown RBP11.68□□□□□ -0.54
NEDD1-211ENST00000557454 MROH8Q9H579 483 aa11.68□□□□□ -0.54
NEDD1-211ENST00000557454 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
NEDD1-211ENST00000557454 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 EYA2O00167 538 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
NEDD1-211ENST00000557454 FCER1AP12319 257 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 ADORA1P30542 326 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 IRS1P35568 1242 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 POTEHQ6S545 545 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 SLC4A10Q6U841 1118 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
NEDD1-211ENST00000557454 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
NEDD1-211ENST00000557454 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms