RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
PSEN1-221ENST00000557293 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
PSEN1-221ENST00000557293 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
PSEN1-221ENST00000557293 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
PSEN1-221ENST00000557293 TBX21Q9UL17 535 aa15.29■□□□□ 0.04
PSEN1-221ENST00000557293 CDK7P50613 346 aa15.28■□□□□ 0.04
PSEN1-221ENST00000557293 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
PSEN1-221ENST00000557293 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
PSEN1-221ENST00000557293 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
PSEN1-221ENST00000557293 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
PSEN1-221ENST00000557293 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
PSEN1-221ENST00000557293 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
PSEN1-221ENST00000557293 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
PSEN1-221ENST00000557293 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.04
PSEN1-221ENST00000557293 BCAR3O75815 825 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 POLR3DP05423 398 aaPredicted RBP15.27■□□□□ 0.04
PSEN1-221ENST00000557293 PLA2G5P39877 138 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 ACLYP53396 1101 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 MFSD5Q6N075 450 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 RIOX2Q8IUF8 465 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
PSEN1-221ENST00000557293 MUC3AQ02505 3323 aa15.27■□□□□ 0.03
PSEN1-221ENST00000557293 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 SMIM22K7EJ46 135 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
PSEN1-221ENST00000557293 FLOT1O75955 427 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 SLC25A27O95847 323 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 SNAI1O95863 264 aaPredicted RBP15.26■□□□□ 0.03
PSEN1-221ENST00000557293 CYP2D6P10635 497 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 KCNA10Q16322 511 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 THEGQ9P2T0 379 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
PSEN1-221ENST00000557293 PLXNA1Q9UIW2 1896 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 MYADML2A6NDP7 307 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 MRPS5P82675 430 aaKnown RBP15.25■□□□□ 0.03
PSEN1-221ENST00000557293 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 CLUAP1Q96AJ1 413 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 GAS2L1Q99501 681 aaPredicted RBP15.25■□□□□ 0.03
PSEN1-221ENST00000557293 MMP19Q99542 508 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 STARD7Q9NQZ5 370 aa15.25■□□□□ 0.03
PSEN1-221ENST00000557293 PARP14Q460N5 1801 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 CHD9Q3L8U1 2897 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 SYNRGQ9UMZ2 1314 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 ACRP10323 421 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 AKR1A1P14550 325 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 AKR1B1P15121 316 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 CSF2RAP15509 400 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 CCDC85BQ15834 202 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-221ENST00000557293 TMED8Q6PL24 325 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-221ENST00000557293 DCP1AQ9NPI6 582 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-221ENST00000557293 MCM9Q9NXL9 1143 aa15.24■□□□□ 0.03
PSEN1-221ENST00000557293 ZNF214Q9UL59 606 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-221ENST00000557293 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 ADCY6O43306 1168 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 BMP1P13497 986 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 STAT3P40763 770 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 PPIGQ13427 754 aaKnown RBP eCLIP15.23■□□□□ 0.03
PSEN1-221ENST00000557293 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
PSEN1-221ENST00000557293 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 SDR42E1Q8WUS8 393 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
PSEN1-221ENST00000557293 NCOR1O75376 2440 aa15.23■□□□□ 0.03
PSEN1-221ENST00000557293 COL11A1P12107 1806 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 ELP1O95163 1332 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 DNAJC25-GNG10A0A024R161 153 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 MOXD2PA6NHM9 499 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 VWA5AO00534 786 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 WDR46O15213 610 aaKnown RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 HOXD11P31277 338 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 KCTD2Q14681 263 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 MAMDC4Q6UXC1 1216 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 CCDC129Q6ZRS4 1044 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 NECAB3Q96P71 396 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 CRNKL1Q9BZJ0 848 aaKnown RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 CXXC1Q9P0U4 656 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 FAM184BQ9ULE4 1060 aa15.22■□□□□ 0.03
PSEN1-221ENST00000557293 YBX2Q9Y2T7 364 aaKnown RBP15.22■□□□□ 0.03
PSEN1-221ENST00000557293 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
PSEN1-221ENST00000557293 CTAGE5O15320 804 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 DUSP11O75319 330 aaKnown RBP15.21■□□□□ 0.03
PSEN1-221ENST00000557293 PDE6AP16499 860 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
PSEN1-221ENST00000557293 ICA1Q05084 483 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 LCORLQ8N3X6 602 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 HERVK_113Q902F9 699 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 FAM122AQ96E09 287 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
PSEN1-221ENST00000557293 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms