RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SENP6Q9GZR1 1112 aaPredicted RBP19.02■□□□□ 0.64
TUBB3-213ENST00000557262 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 GPAA1O43292 621 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 RAD21O60216 631 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 RASA1P20936 1047 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 FBXO28Q9NVF7 368 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 NYAP2Q9P242 653 aa19.01■□□□□ 0.63
TUBB3-213ENST00000557262 TTC41PQ6P2S7 1318 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 LAMA3Q16787 3333 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
TUBB3-213ENST00000557262 VWA5AO00534 786 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 ERC2O15083 957 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 APPP05067 770 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 STAT3P40763 770 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 MAGEA10P43363 369 aaPredicted RBP19■□□□□ 0.63
TUBB3-213ENST00000557262 FAM83BQ5T0W9 1011 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
TUBB3-213ENST00000557262 DNM1LO00429 736 aa18.99■□□□□ 0.63
TUBB3-213ENST00000557262 ZNF444Q8N0Y2 327 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-213ENST00000557262 MAML3Q96JK9 1138 aa18.99■□□□□ 0.63
TUBB3-213ENST00000557262 ZNF287Q9HBT7 754 aa18.99■□□□□ 0.63
TUBB3-213ENST00000557262 DNAH12Q6ZR08 3092 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 A0A0G2JMZ2 1700 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 F5H6K3 240 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 M0R2C6 588 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-213ENST00000557262 SEPT4O43236 478 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 TDO2P48775 406 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 KLRC3Q07444 240 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 PRAMEF19Q5SWL8 479 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 IFNL3Q8IZI9 196 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 MMP19Q99542 508 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 EPB41L4AQ9HCS5 686 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-213ENST00000557262 CLIP2Q9UDT6 1046 aa18.98■□□□□ 0.63
TUBB3-213ENST00000557262 ROBO3Q96MS0 1386 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 COPB2P35606 906 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 KCTD2Q14681 263 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 GJC2Q5T442 439 aaPredicted RBP18.97■□□□□ 0.63
TUBB3-213ENST00000557262 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 NACAP1Q9BZK3 213 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 DIS3Q9Y2L1 958 aaKnown RBP18.97■□□□□ 0.63
TUBB3-213ENST00000557262 ZNF236Q9UL36 1845 aa18.97■□□□□ 0.63
TUBB3-213ENST00000557262 ANO1Q5XXA6 986 aa18.96■□□□□ 0.63
TUBB3-213ENST00000557262 PRPF38AQ8NAV1 312 aaKnown RBP18.96■□□□□ 0.63
TUBB3-213ENST00000557262 REPS2Q8NFH8 660 aa18.96■□□□□ 0.63
TUBB3-213ENST00000557262 MKL1Q969V6 931 aa18.96■□□□□ 0.63
TUBB3-213ENST00000557262 LRCH3Q96II8 777 aa18.96■□□□□ 0.63
TUBB3-213ENST00000557262 NUP88Q99567 741 aaPredicted RBP18.96■□□□□ 0.63
TUBB3-213ENST00000557262 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
TUBB3-213ENST00000557262 UBE2OQ9C0C9 1292 aaKnown RBP18.96■□□□□ 0.63
TUBB3-213ENST00000557262 ZNF214Q9UL59 606 aaPredicted RBP18.96■□□□□ 0.63
TUBB3-213ENST00000557262 FRMPD3Q5JV73 1810 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 IGKV6D-41A0A0C4DH26 115 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 PGK2P07205 417 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
TUBB3-213ENST00000557262 ZNF792Q3KQV3 632 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 TDHQ8IZJ6 230 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 OTUD7AQ8TE49 926 aaPredicted RBP18.95■□□□□ 0.62
TUBB3-213ENST00000557262 SEC62Q99442 399 aaKnown RBP18.95■□□□□ 0.62
TUBB3-213ENST00000557262 FSD1Q9BTV5 496 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 NRBP1Q9UHY1 535 aa18.95■□□□□ 0.62
TUBB3-213ENST00000557262 KBTBD13C9JR72 458 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 PRDM1O75626 825 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 NDUFB10O96000 172 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 PDE4BQ07343 736 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 LRIT3Q3SXY7 679 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 ZMYM1Q5SVZ6 1142 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 MTMR4Q9NYA4 1195 aa18.94■□□□□ 0.62
TUBB3-213ENST00000557262 ZNFX1Q9P2E3 1918 aaKnown RBP18.94■□□□□ 0.62
TUBB3-213ENST00000557262 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 ZBED4O75132 1171 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 SLC3A2P08195 630 aaKnown RBP18.93■□□□□ 0.62
TUBB3-213ENST00000557262 MX1P20591 662 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 RRP1P56182 461 aaKnown RBP18.93■□□□□ 0.62
TUBB3-213ENST00000557262 MDM2Q00987 491 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-213ENST00000557262 GPR153Q6NV75 609 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 SLC39A5Q6ZMH5 540 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 CEP95Q96GE4 821 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 TEX13BQ9BXU2 312 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-213ENST00000557262 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
TUBB3-213ENST00000557262 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-213ENST00000557262 ATP2A1O14983 1001 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 TTLL1O95922 423 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-213ENST00000557262 RTP1P59025 263 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 LRRC41Q15345 812 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 SNRNP48Q6IEG0 339 aaKnown RBP18.92■□□□□ 0.62
TUBB3-213ENST00000557262 NEDD1Q8NHV4 660 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 LBHD1Q9BQE6 289 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-213ENST00000557262 NAPBQ9H115 298 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 PRKAG2Q9UGJ0 569 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 FEM1BQ9UK73 627 aa18.92■□□□□ 0.62
TUBB3-213ENST00000557262 CTDP1Q9Y5B0 961 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-213ENST00000557262 COL11A1P12107 1806 aaPredicted RBP18.91■□□□□ 0.62
TUBB3-213ENST00000557262 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms