RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 ARL4AP40617 200 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 RPL6Q02878 288 aaKnown RBP3.67□□□□□ -1.82
PTPN21-209ENST00000557249 PUM1Q14671 1186 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN21-209ENST00000557249 RNF111Q6ZNA4 994 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 CEP128Q6ZU80 1094 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 MZB1Q8WU39 189 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 LINC01599Q8WXQ3 324 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 JARID2Q92833 1246 aaPredicted RBP3.67□□□□□ -1.82
PTPN21-209ENST00000557249 SHISA4Q96DD7 197 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 SETDB2Q96T68 719 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 BDH2Q9BUT1 245 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 ASPNQ9BXN1 380 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 CNTD2Q9H8S5 307 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 LUC7LQ9NQ29 371 aaKnown RBP3.67□□□□□ -1.82
PTPN21-209ENST00000557249 WWC3Q9ULE0 1092 aa3.67□□□□□ -1.82
PTPN21-209ENST00000557249 RBM47A0AV96 593 aaKnown RBP3.66□□□□□ -1.82
PTPN21-209ENST00000557249 UPK3BL1B0FP48 263 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 UPK3BL2E5RIL1 263 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 NRDCO43847 1150 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 MPOP05164 745 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 PNLIPP16233 465 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 KIR2DL1P43626 348 aaPredicted RBP3.66□□□□□ -1.82
PTPN21-209ENST00000557249 KIR2DL2P43627 348 aaPredicted RBP3.66□□□□□ -1.82
PTPN21-209ENST00000557249 AGMOQ6ZNB7 445 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 FRMD5Q7Z6J6 570 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 LINC01356Q8N9X3 169 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 SYT8Q8NBV8 401 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 ENOX1Q8TC92 643 aaKnown RBP3.66□□□□□ -1.82
PTPN21-209ENST00000557249 PWWP2AQ96N64 755 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 ADAM7Q9H2U9 754 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 EBF1Q9UH73 591 aa3.66□□□□□ -1.82
PTPN21-209ENST00000557249 CILPO75339 1184 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 RLBP1P12271 317 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 KCNC1P48547 511 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 LIG3P49916 1009 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 PCBP3P57721 371 aaKnown RBP3.65□□□□□ -1.83
PTPN21-209ENST00000557249 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 FMR1Q06787 632 aaKnown RBP eCLIP3.65□□□□□ -1.83
PTPN21-209ENST00000557249 FAM129CQ86XR2 697 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 NLGN1Q8N2Q7 840 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 RETREG2Q8NC44 543 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 MAP6Q96JE9 813 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 CCDC74BQ96LY2 380 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 KREMEN1Q96MU8 473 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 MYRFQ9Y2G1 1151 aa3.65□□□□□ -1.83
PTPN21-209ENST00000557249 SHISA3A0PJX4 238 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 IRS4O14654 1257 aaPredicted RBP3.64□□□□□ -1.83
PTPN21-209ENST00000557249 SDHBP21912 280 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 GBP1P32455 592 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 CDR1P51861 262 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 RTP1P59025 263 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 YBX1P67809 324 aaKnown RBP3.64□□□□□ -1.83
PTPN21-209ENST00000557249 EFEMP1Q12805 493 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 NMIQ13287 307 aaPredicted RBP3.64□□□□□ -1.83
PTPN21-209ENST00000557249 RAB3GAP1Q15042 981 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 ZNF827Q17R98 1081 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 UBXN11Q5T124 520 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 GALNT18Q6P9A2 607 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 PHACTR4Q8IZ21 702 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 G6PC3Q9BUM1 346 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 FOXP3Q9BZS1 431 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 KLHL3Q9UH77 587 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 CORINQ9Y5Q5 1042 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 TAF6LQ9Y6J9 622 aa3.64□□□□□ -1.83
PTPN21-209ENST00000557249 NOTOA8MTQ0 251 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 K7ESM1 405 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 BUB1BO60566 1050 aaPredicted RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 EIF5BO60841 1220 aaKnown RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 FKTNO75072 461 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 LDHBP07195 334 aaKnown RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 PFKLP17858 780 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 ERVFRD-1P60508 538 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 RNF4P78317 190 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 LAPTM5Q13571 262 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 MLECQ14165 292 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 TMEM201Q5SNT2 666 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 TMC6Q7Z403 805 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 LDHDQ86WU2 507 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 SLFN12Q8IYM2 578 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 DAGLBQ8NCG7 672 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 SYTL5Q8TDW5 730 aaPredicted RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 ASB16Q96NS5 453 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 EPB41L4AQ9HCS5 686 aaPredicted RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 USP40Q9NVE5 1235 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 TCFL5Q9UL49 500 aa3.63□□□□□ -1.83
PTPN21-209ENST00000557249 TTBK1Q5TCY1 1321 aaPredicted RBP3.63□□□□□ -1.83
PTPN21-209ENST00000557249 WTIPA6NIX2 430 aaPredicted RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 E9PSI1 815 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 SYPP08247 313 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 TFE3P19532 575 aaPredicted RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 CDK11BP21127 795 aaKnown RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 GNA15P30679 374 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 RTP5Q14D33 572 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 IGDCC3Q8IVU1 814 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 TMEFF1Q8IYR6 380 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 USHBP1Q8N6Y0 703 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 ZNF655Q8N720 491 aaPredicted RBP3.62□□□□□ -1.83
PTPN21-209ENST00000557249 TCTN2Q96GX1 697 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 HHIPL1Q96JK4 782 aa3.62□□□□□ -1.83
PTPN21-209ENST00000557249 TNFRSF10DQ9UBN6 386 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms