RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MTMR2Q13614 643 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 CCDC158Q5M9N0 1113 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
VRK1-206ENST00000557222 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.62□□□□□ -0.71
VRK1-206ENST00000557222 ASCC2Q9H1I8 757 aaPredicted RBP10.62□□□□□ -0.71
VRK1-206ENST00000557222 PCDHB15Q9Y5E8 787 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 XRCC5P13010 732 aaKnown RBP10.61□□□□□ -0.71
VRK1-206ENST00000557222 TRIM27P14373 513 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 BMP8BP34820 402 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 NAA16Q6N069 864 aaPredicted RBP10.61□□□□□ -0.71
VRK1-206ENST00000557222 PI16Q6UXB8 463 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 HMX1Q9NP08 348 aaPredicted RBP10.61□□□□□ -0.71
VRK1-206ENST00000557222 TMOD4Q9NZQ9 345 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
VRK1-206ENST00000557222 LOC285556D6RIA3 1793 aa10.61□□□□□ -0.71
VRK1-206ENST00000557222 PNMA6EA0A0J9YXQ4 647 aa10.6□□□□□ -0.71
VRK1-206ENST00000557222 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
VRK1-206ENST00000557222 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
VRK1-206ENST00000557222 IRX3P78415 501 aaPredicted RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 CCDC84Q86UT8 332 aaPredicted RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 SOCS4Q8WXH5 440 aa10.6□□□□□ -0.71
VRK1-206ENST00000557222 PAWRQ96IZ0 340 aaKnown RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
VRK1-206ENST00000557222 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
VRK1-206ENST00000557222 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 MAPK4P31152 587 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 TNNI3KQ59H18 835 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 TTC39AQ5SRH9 613 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 GPRC5AQ8NFJ5 357 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 SSH3Q8TE77 659 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
VRK1-206ENST00000557222 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 TOR4AQ9NXH8 423 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 OGDHLQ9ULD0 1010 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
VRK1-206ENST00000557222 FPGT-TNNI3KV9GXZ4 949 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 COL6A3P12111 3177 aa10.59□□□□□ -0.71
VRK1-206ENST00000557222 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
VRK1-206ENST00000557222 HLA-DOAP06340 250 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 HERVK_113P62684 666 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 MYSM1Q5VVJ2 828 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
VRK1-206ENST00000557222 USP17L2Q6R6M4 530 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
VRK1-206ENST00000557222 TGFBRAP1Q8WUH2 860 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 GDF15Q99988 308 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
VRK1-206ENST00000557222 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 FLT1P17948 1338 aa10.58□□□□□ -0.72
VRK1-206ENST00000557222 WNT7AO00755 349 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 PDE3AQ14432 1141 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 PTPRNQ16849 979 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 MAPKAPK5Q8IW41 473 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 CYP4X1Q8N118 509 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 TRIB2Q92519 343 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 USP6NLQ92738 828 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 C12orf42Q96LP6 360 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 EHD4Q9H223 541 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 C11orf49Q9H6J7 331 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 DNAJC18Q9H819 358 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 RBPJLQ9UBG7 517 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 ZBTB21Q9ULJ3 1066 aa10.57□□□□□ -0.72
VRK1-206ENST00000557222 SURF6O75683 361 aaKnown RBP10.56□□□□□ -0.72
VRK1-206ENST00000557222 BCAR3O75815 825 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
VRK1-206ENST00000557222 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 RGS2P41220 211 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 USP14P54578 494 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 ERVK-9P63128 1117 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 ERVK-24P63145 666 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 SKOR1P84550 965 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 OS9Q13438 667 aaPredicted RBP10.56□□□□□ -0.72
VRK1-206ENST00000557222 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 TATDN1Q6P1N9 297 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 DIS3LQ8TF46 1054 aaKnown RBP10.56□□□□□ -0.72
VRK1-206ENST00000557222 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
VRK1-206ENST00000557222 SNRKQ9NRH2 765 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 RABGAP1Q9Y3P9 1069 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 DNAH12Q6ZR08 3092 aa10.56□□□□□ -0.72
VRK1-206ENST00000557222 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
VRK1-206ENST00000557222 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms