RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 RTP1P59025 263 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 TMEM132BQ14DG7 1078 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 UBE3CQ15386 1083 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 GJC2Q5T442 439 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 C16orf86Q6ZW13 317 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 SPICE1Q8N0Z3 855 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 ARHGEF10LQ9HCE6 1279 aa12.91□□□□□ -0.34
HNRNPC-230ENST00000557201 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 A0A0C4DFX4 3053 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 USP17L21D6R901 530 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 SLC39A5Q6ZMH5 540 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 MAML3Q96JK9 1138 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 SH2D4AQ9H788 454 aa12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-230ENST00000557201 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 REPS2Q8NFH8 660 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
HNRNPC-230ENST00000557201 SLC25A27O95847 323 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 PLS1Q14651 629 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 LRRC41Q15345 812 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 MYH8P13535 1937 aa12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-230ENST00000557201 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 VWA5AO00534 786 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 FCER1AP12319 257 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 GUCD1Q96NT3 240 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 COL11A1P12107 1806 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-230ENST00000557201 ADCYAP1R1P41586 468 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 TRIM60Q495X7 471 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 PDLIM7Q9NR12 457 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 PHF24Q9UPV7 400 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 MYH7P12883 1935 aa12.86□□□□□ -0.35
HNRNPC-230ENST00000557201 ZNFX1Q9P2E3 1918 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 PGK2P07205 417 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 ZNF865P0CJ78 1059 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 STAT3P40763 770 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 SHHQ15465 462 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 C9orf50Q5SZB4 431 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 FAM83BQ5T0W9 1011 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 MMP19Q99542 508 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 PRKAG2Q9UGJ0 569 aa12.85□□□□□ -0.35
HNRNPC-230ENST00000557201 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 RASA1P20936 1047 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 GIMAP6Q6P9H5 292 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 BADQ92934 168 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 OSBP2Q969R2 916 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 FERMT2Q96AC1 680 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 CDH23Q9H251 3354 aa12.84□□□□□ -0.35
HNRNPC-230ENST00000557201 DNAJC25-GNG10A0A024R161 153 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms