RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 MRPS5P82675 430 aaKnown RBP11.38□□□□□ -0.59
SYNE2-224ENST00000557024 ABCB5Q2M3G0 1257 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 AKNAD1Q5T1N1 836 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 XPNPEP3Q9NQH7 507 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 RLFQ13129 1914 aa11.38□□□□□ -0.59
SYNE2-224ENST00000557024 CHD9Q3L8U1 2897 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 GRXCR1A8MXD5 290 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 CENPBP07199 599 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 RARBP10826 455 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 LENG1Q96BZ8 264 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 MAML3Q96JK9 1138 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
SYNE2-224ENST00000557024 PBX4Q9BYU1 374 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 SLC5A4Q9NY91 659 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 SERPINB13Q9UIV8 391 aa11.37□□□□□ -0.59
SYNE2-224ENST00000557024 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-224ENST00000557024 IGFBP4P22692 258 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 USP5P45974 858 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 FAAP100Q0VG06 881 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 ADGRE1Q14246 886 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 PLS1Q14651 629 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 COG2Q14746 738 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 RNF180Q86T96 592 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 CABP5Q9NP86 173 aa11.36□□□□□ -0.59
SYNE2-224ENST00000557024 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
SYNE2-224ENST00000557024 DCDC2CA8MYV0 355 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 E9PSI1 815 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-224ENST00000557024 CYP7A1P22680 504 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 GUCY1A2P33402 732 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 MTX1Q13505 466 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 E2F4Q16254 413 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 EHD4Q9H223 541 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 MROH8Q9H579 483 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 PIH1D3Q9NQM4 214 aaKnown RBP11.35□□□□□ -0.59
SYNE2-224ENST00000557024 HOXC10Q9NYD6 342 aa11.35□□□□□ -0.59
SYNE2-224ENST00000557024 A0A1W2PRG0 241 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 TIMP1P01033 207 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 FCER1AP12319 257 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 SHMT1P34896 483 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 ZAP70P43403 619 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 SEPT2Q15019 361 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 TMEM240Q5SV17 173 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 C16orf59Q7L2K0 433 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
SYNE2-224ENST00000557024 STARD7Q9NQZ5 370 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
SYNE2-224ENST00000557024 MPHOSPH10O00566 681 aaKnown RBP11.33□□□□□ -0.6
SYNE2-224ENST00000557024 PGK2P07205 417 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 GNAI3P08754 354 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 ACRP10323 421 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 ACLYP53396 1101 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 SLFN5Q08AF3 891 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNE2-224ENST00000557024 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 ATG4CQ96DT6 458 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 C1QTNF1Q9BXJ1 281 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 NRBP1Q9UHY1 535 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 TBX21Q9UL17 535 aa11.33□□□□□ -0.6
SYNE2-224ENST00000557024 ADAMTS4O75173 837 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 IDH1O75874 414 aaKnown RBP11.32□□□□□ -0.6
SYNE2-224ENST00000557024 FLOT1O75955 427 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 ZNF865P0CJ78 1059 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-224ENST00000557024 AKR1A1P14550 325 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 CSF2RAP15509 400 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 PDE4AP27815 886 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 PLCD1P51178 756 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 TFF2Q03403 129 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 PPIGQ13427 754 aaKnown RBP eCLIP11.32□□□□□ -0.6
SYNE2-224ENST00000557024 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 CCDC174Q6PII3 467 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 MICALL1Q8N3F8 863 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 NUP133Q8WUM0 1156 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 MMP19Q99542 508 aa11.32□□□□□ -0.6
SYNE2-224ENST00000557024 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms