RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 KRTAP9-9Q9BYP9 154 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 KRTAP9-4Q9BYQ2 154 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 UBP1Q9NZI7 540 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
HIF1A-209ENST00000556827 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 WRNQ14191 1432 aaPredicted RBP eCLIP8.15□□□□□ -1.1
HIF1A-209ENST00000556827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.15□□□□□ -1.1
HIF1A-209ENST00000556827 EGR3Q06889 387 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 GAB4Q2WGN9 574 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
HIF1A-209ENST00000556827 EAF1Q96JC9 268 aaPredicted RBP8.15□□□□□ -1.1
HIF1A-209ENST00000556827 KREMEN1Q96MU8 473 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 ASPNQ9BXN1 380 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 GPR62Q9BZJ7 368 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 KCNQ5Q9NR82 932 aa8.15□□□□□ -1.1
HIF1A-209ENST00000556827 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.15□□□□□ -1.1
HIF1A-209ENST00000556827 LRRN2O75325 713 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 ERCC5P28715 1186 aaPredicted RBP8.14□□□□□ -1.11
HIF1A-209ENST00000556827 GBP1P32455 592 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 KIAA0825Q8IV33 1275 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 ZNF654Q8IZM8 581 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 ABHD4Q8TB40 342 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 KIF2CQ99661 725 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
HIF1A-209ENST00000556827 DNAJA2O60884 412 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 SRFP11831 508 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 MESP2Q0VG99 397 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 PRR23BQ6ZRT6 265 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 MYLIPQ8WY64 445 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 SYTL4Q96C24 671 aaPredicted RBP8.13□□□□□ -1.11
HIF1A-209ENST00000556827 ADAMTS10Q9H324 1103 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
HIF1A-209ENST00000556827 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
HIF1A-209ENST00000556827 ROBO2Q9HCK4 1378 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 RAG1P15918 1043 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 PAK2Q13177 524 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 CLEC16AQ2KHT3 1053 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 SEZ6Q53EL9 994 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 ARSHQ5FYA8 562 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 DIRC2Q96SL1 478 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 PCDHB14Q9Y5E9 798 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
HIF1A-209ENST00000556827 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
HIF1A-209ENST00000556827 ERVFC1P60507 584 aa8.11□□□□□ -1.11
HIF1A-209ENST00000556827 TGIF2Q9GZN2 237 aa8.11□□□□□ -1.11
HIF1A-209ENST00000556827 ASCC2Q9H1I8 757 aaPredicted RBP8.11□□□□□ -1.11
HIF1A-209ENST00000556827 NSUN3Q9H649 340 aaKnown RBP8.11□□□□□ -1.11
HIF1A-209ENST00000556827 RNF4P78317 190 aa8.1□□□□□ -1.11
HIF1A-209ENST00000556827 APOBRQ0VD83 1088 aa8.1□□□□□ -1.11
HIF1A-209ENST00000556827 PPP1R16BQ96T49 567 aa8.1□□□□□ -1.11
HIF1A-209ENST00000556827 NT5C1AQ9BXI3 368 aa8.1□□□□□ -1.11
HIF1A-209ENST00000556827 GMIPQ9P107 970 aa8.1□□□□□ -1.11
HIF1A-209ENST00000556827 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 RGS13O14921 159 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 HPXP02790 462 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
HIF1A-209ENST00000556827 NKD1Q969G9 470 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 CCSER2Q9H7U1 834 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 FHAD1B1AJZ9 1412 aa8.09□□□□□ -1.11
HIF1A-209ENST00000556827 GRIN2AQ12879 1464 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 SHISA3A0PJX4 238 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 MCM4P33991 863 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
HIF1A-209ENST00000556827 RAP1GAPP47736 663 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 OVOS1Q6IE37 1185 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
HIF1A-209ENST00000556827 OXR1Q8N573 874 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 BHLHE22Q8NFJ8 381 aaPredicted RBP8.08□□□□□ -1.12
HIF1A-209ENST00000556827 EPB41L4BQ9H329 900 aa8.08□□□□□ -1.12
HIF1A-209ENST00000556827 UBOX5O94941 541 aa8.07□□□□□ -1.12
HIF1A-209ENST00000556827 ATE1O95260 518 aa8.07□□□□□ -1.12
HIF1A-209ENST00000556827 ZGLP1P0C6A0 271 aa8.07□□□□□ -1.12
HIF1A-209ENST00000556827 CLCQ05315 142 aa8.07□□□□□ -1.12
HIF1A-209ENST00000556827 NMIQ13287 307 aaPredicted RBP8.07□□□□□ -1.12
HIF1A-209ENST00000556827 GK5Q6ZS86 529 aa8.07□□□□□ -1.12
HIF1A-209ENST00000556827 FBXO15Q8NCQ5 510 aaPredicted RBP8.07□□□□□ -1.12
HIF1A-209ENST00000556827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.07□□□□□ -1.12
HIF1A-209ENST00000556827 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
HIF1A-209ENST00000556827 TSPAN15O95858 294 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 POLR2BP30876 1174 aaKnown RBP8.06□□□□□ -1.12
HIF1A-209ENST00000556827 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 RNF32Q9H0A6 362 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 CAPN10Q9HC96 672 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 INPP5FQ9Y2H2 1132 aa8.06□□□□□ -1.12
HIF1A-209ENST00000556827 NUP160Q12769 1436 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 FITM1A5D6W6 292 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 DUSP4Q13115 394 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 GPRASP2Q96D09 838 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 GINM1Q9NU53 330 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 PBRM1Q86U86 1689 aa8.05□□□□□ -1.12
HIF1A-209ENST00000556827 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
HIF1A-209ENST00000556827 ABCA5Q8WWZ7 1642 aa8.04□□□□□ -1.12
HIF1A-209ENST00000556827 ZNF165P49910 485 aa8.04□□□□□ -1.12
HIF1A-209ENST00000556827 TEKQ02763 1124 aa8.04□□□□□ -1.12
HIF1A-209ENST00000556827 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms