RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 TIMELESSQ9UNS1 1208 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 SYNRGQ9UMZ2 1314 aa5.39□□□□□ -1.55
ATXN3-242ENST00000556644 SMCHD1A6NHR9 2005 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
ATXN3-242ENST00000556644 ENTPD3O75355 529 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 PRDX5P30044 214 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 CDK7P50613 346 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 CASP7P55210 303 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 MAP3K10Q02779 954 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 MMRN1Q13201 1228 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 MKRN4PQ13434 485 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-242ENST00000556644 UBE4AQ14139 1066 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 GCKRQ14397 625 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 FBXO33Q7Z6M2 555 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 HERC6Q8IVU3 1022 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 PI4KAP1Q8N8J0 262 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 KCNG4Q8TDN1 519 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 GLT1D1Q96MS3 346 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 NOC4LQ9BVI4 516 aaKnown RBP5.38□□□□□ -1.55
ATXN3-242ENST00000556644 PLA2G12BQ9BX93 195 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 PUS3Q9BZE2 481 aaKnown RBP5.38□□□□□ -1.55
ATXN3-242ENST00000556644 SUGCTQ9HAC7 445 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 FAM50BQ9Y247 325 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 RABGAP1Q9Y3P9 1069 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 ATAD5Q96QE3 1844 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 MROH7Q68CQ1 1323 aa5.38□□□□□ -1.55
ATXN3-242ENST00000556644 VPS13AQ96RL7 3174 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 WDR87Q6ZQQ6 2873 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 A0A0U1RQG5 324 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 ARVCFO00192 962 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 CHL1O00533 1208 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 DDX58O95786 925 aaKnown RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 HOXB7P09629 217 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 PPP2R1AP30153 589 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 CAP2P40123 477 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 NEXNQ0ZGT2 675 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 COL9A3Q14050 684 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 RSPO4Q2I0M5 234 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 GTF3C2Q8WUA4 911 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 ASIC4Q96FT7 647 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 MAML3Q96JK9 1138 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 SLC9A7Q96T83 725 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 HINFPQ9BQA5 517 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 OSBPL5Q9H0X9 879 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-242ENST00000556644 TRPV6Q9H1D0 765 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 EMILIN3Q9NT22 766 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 BABAM1Q9NWV8 329 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 CLDND1Q9NY35 253 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 LMCD1Q9NZU5 365 aa5.37□□□□□ -1.55
ATXN3-242ENST00000556644 MOXD2PA6NHM9 499 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 CYSRT1A8MQ03 144 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 KIF28PB7ZC32 967 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L10C9JJH3 530 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 STXBP3O00186 592 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 CSPG5O95196 566 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 GDF11O95390 407 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 CD4P01730 458 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 PGK2P07205 417 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 ASGR1P07306 291 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 C6orf222P0C671 652 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 AKR1A1P14550 325 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 FOXO4P98177 505 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 SIGLEC14Q08ET2 396 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 SMAD2Q15796 467 aaKnown RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 CAVIN4Q5BKX8 364 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 TCEAL5Q5H9L2 206 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 CCSAPQ6IQ19 270 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 LMBR1LQ6UX01 489 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 KSR2Q6VAB6 950 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 RPAINQ86UA6 219 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 RPUSD2Q8IZ73 545 aaKnown RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 TMEM105Q8N8V8 129 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 KLHDC9Q8NEP7 349 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 POP1Q99575 1024 aaKnown RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 TSEN34Q9BSV6 310 aaKnown RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 WDR18Q9BV38 432 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 IDI2Q9BXS1 227 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 MOV10L1Q9BXT6 1211 aaKnown RBP5.36□□□□□ -1.55
ATXN3-242ENST00000556644 DLL3Q9NYJ7 618 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 SUGT1Q9Y2Z0 365 aa5.36□□□□□ -1.55
ATXN3-242ENST00000556644 ZNF236Q9UL36 1845 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ELP1O95163 1332 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 SPDYE16A6NNV3 312 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 MBTPS2O43462 519 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ZNF865P0CJ78 1059 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ERCC3P19447 782 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 LTBRP36941 435 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 DLX2Q07687 328 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 CCDC57Q2TAC2 916 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 MCTP2Q6DN12 878 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 FAM117BQ6P1L5 589 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 CRACR2BQ8N4Y2 399 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 DCLK2Q8N568 766 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 PABPC5Q96DU9 382 aaKnown RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 FEZ1Q99689 392 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 C17orf80Q9BSJ5 609 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ZBED2Q9BTP6 218 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms