RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 MOV10L1Q9BXT6 1211 aaKnown RBP12.68□□□□□ -0.38
GABRB3-211ENST00000556636 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-211ENST00000556636 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 PPP1R9AQ9ULJ8 1098 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 RLFQ13129 1914 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 VWA5AO00534 786 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 RAD21O60216 631 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 SOX10P56693 466 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 MTFR1Q15390 333 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
GABRB3-211ENST00000556636 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 TTC14Q96N46 770 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 SPATC1LQ9H0A9 340 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
GABRB3-211ENST00000556636 MYH8P13535 1937 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 B4E1Z4 1266 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 ADCY3O60266 1144 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 CYP21A2P08686 494 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 ELNP15502 786 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 PTPREP23469 700 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 MCCP23508 829 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 CCNA1P78396 465 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 RASGRP2Q7LDG7 609 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 PRPF38AQ8NAV1 312 aaKnown RBP12.66□□□□□ -0.38
GABRB3-211ENST00000556636 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 ESYT1Q9BSJ8 1104 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
GABRB3-211ENST00000556636 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
GABRB3-211ENST00000556636 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-211ENST00000556636 PLA2G6O60733 806 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 KDM4AO75164 1064 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
GABRB3-211ENST00000556636 BMP3P12645 472 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
GABRB3-211ENST00000556636 ERCC3P19447 782 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 CYP2B6P20813 491 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-211ENST00000556636 SLAIN1Q8ND83 568 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 SHCBP1Q8NEM2 672 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 ESR2Q92731 530 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 SLF1Q9BQI6 1058 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 FEM1BQ9UK73 627 aa12.65□□□□□ -0.38
GABRB3-211ENST00000556636 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
GABRB3-211ENST00000556636 KIAA0100Q14667 2235 aaKnown RBP12.64□□□□□ -0.39
GABRB3-211ENST00000556636 ATP2A1O14983 1001 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-211ENST00000556636 IGHA2P01877 340 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 STAT3P40763 770 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 NT5C2P49902 561 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 GRB14Q14449 540 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 CCAR1Q8IX12 1150 aaKnown RBP12.64□□□□□ -0.39
GABRB3-211ENST00000556636 SOCS4Q8WXH5 440 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
GABRB3-211ENST00000556636 RBM8AQ9Y5S9 174 aaKnown RBP12.64□□□□□ -0.39
GABRB3-211ENST00000556636 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
GABRB3-211ENST00000556636 MGAMO43451 1857 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 STRNO43815 780 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 COBLO75128 1261 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 INHAP05111 366 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 HOXC6P09630 235 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 SNHG28P0DPA3 235 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
GABRB3-211ENST00000556636 SLC1A4P43007 532 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 TRIM32Q13049 653 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 PLS1Q14651 629 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 NECTIN1Q15223 517 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 CCL14Q16627 93 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 TTBK2Q6IQ55 1244 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 TRIB2Q92519 343 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 KRT23Q9C075 422 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 MROH8Q9H579 483 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 SLC38A10Q9HBR0 1119 aa12.63□□□□□ -0.39
GABRB3-211ENST00000556636 E7EWF7 191 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms