RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 IL17RBQ9NRM6 502 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 HOXC10Q9NYD6 342 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 ADAMTS5Q9UNA0 930 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
VTI1B-206ENST00000556461 A0A0G2JMZ2 1700 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 SLC3A2P08195 630 aaKnown RBP9.63□□□□□ -0.87
VTI1B-206ENST00000556461 FGRP09769 529 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 PTPREP23469 700 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 UBXN2AP68543 259 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 REPS2Q8NFH8 660 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 DIAPH3Q9NSV4 1193 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 FLRT1Q9NZU1 646 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
VTI1B-206ENST00000556461 VWA5AO00534 786 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 ORC4O43929 436 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 RANBP6O60518 1105 aaKnown RBP9.62□□□□□ -0.87
VTI1B-206ENST00000556461 TTLL1O95922 423 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 HMGCRP04035 888 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 GJB1P08034 283 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 ERCC3P19447 782 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 GJA8P48165 433 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 CCNA1P78396 465 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 GRB14Q14449 540 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 PLS1Q14651 629 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 RRP12Q5JTH9 1297 aaKnown RBP9.62□□□□□ -0.87
VTI1B-206ENST00000556461 SLFN13Q68D06 897 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 CCAR1Q8IX12 1150 aaKnown RBP9.62□□□□□ -0.87
VTI1B-206ENST00000556461 NPLOC4Q8TAT6 608 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 SOCS4Q8WXH5 440 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
VTI1B-206ENST00000556461 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
VTI1B-206ENST00000556461 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
VTI1B-206ENST00000556461 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 NEDD4P46934 1319 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 CEP290O15078 2479 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 SLC15A5A6NIM6 579 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 TSPY2A6NKD2 308 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 COBLO75128 1261 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 XRCC5P13010 732 aaKnown RBP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 RGS2P41220 211 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 NOVP48745 357 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 CACNB2Q08289 660 aaPredicted RBP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 MAP3K21Q5TCX8 1036 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 UBE2Q1Q7Z7E8 422 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 MB21D1Q8N884 522 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 GMCL1P1Q8NEA9 526 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 SHCBP1Q8NEM2 672 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 U2AF1L4Q8WU68 220 aaKnown RBP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 APBA2Q99767 749 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 TOMM22Q9NS69 142 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 ZNF214Q9UL59 606 aaPredicted RBP9.61□□□□□ -0.87
VTI1B-206ENST00000556461 RIPK3Q9Y572 518 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 PARP14Q460N5 1801 aa9.61□□□□□ -0.87
VTI1B-206ENST00000556461 HIP1O00291 1037 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 SGPL1O95470 568 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 IGHA2P01877 340 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 HOXC6P09630 235 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
VTI1B-206ENST00000556461 MCCP23508 829 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 CHMLP26374 656 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 ADORA2AP29274 412 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 CCND3P30281 292 aaPredicted RBP9.6□□□□□ -0.87
VTI1B-206ENST00000556461 AKNAD1Q5T1N1 836 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 NCAPG2Q86XI2 1143 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 RIOX2Q8IUF8 465 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 TRPV1Q8NER1 839 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 STX8Q9UNK0 236 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 MTMR7Q9Y216 660 aa9.6□□□□□ -0.87
VTI1B-206ENST00000556461 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 MYH4Q9Y623 1939 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 TMEM232C9JQI7 657 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 BMP3P12645 472 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 TAL1P17542 331 aaPredicted RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 CYP2C19P33261 490 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 STAT3P40763 770 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 SNAP25P60880 206 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 PTH1RQ03431 593 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 RCSD1Q6JBY9 416 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 MFSD6Q6ZSS7 791 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 KCTD1Q719H9 257 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 DIS3LQ8TF46 1054 aaKnown RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 TMEM47Q9BQJ4 181 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 ZKSCAN3Q9BRR0 538 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 DSCC1Q9BVC3 393 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 MROH8Q9H579 483 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 SLC38A10Q9HBR0 1119 aa9.59□□□□□ -0.87
VTI1B-206ENST00000556461 RAVER2Q9HCJ3 691 aaKnown RBP9.59□□□□□ -0.87
VTI1B-206ENST00000556461 HMX1Q9NP08 348 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms