RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MSCO60682 206 aa27.01■■□□□ 1.91
ACTN1-220ENST00000556433 IGHA2P01877 340 aa27.01■■□□□ 1.91
ACTN1-220ENST00000556433 FAM83BQ5T0W9 1011 aa27.01■■□□□ 1.91
ACTN1-220ENST00000556433 OLFML2BQ68BL8 750 aa27.01■■□□□ 1.91
ACTN1-220ENST00000556433 TRPV1Q8NER1 839 aa27.01■■□□□ 1.91
ACTN1-220ENST00000556433 ALPK3Q96L96 1907 aa27■■□□□ 1.91
ACTN1-220ENST00000556433 SLC25A27O95847 323 aa27■■□□□ 1.91
ACTN1-220ENST00000556433 IFNL3Q8IZI9 196 aa27■■□□□ 1.91
ACTN1-220ENST00000556433 ZNF444Q8N0Y2 327 aaPredicted RBP27■■□□□ 1.91
ACTN1-220ENST00000556433 ABRAQ8N0Z2 381 aa27■■□□□ 1.91
ACTN1-220ENST00000556433 A0A1W2PPC1 479 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 FCER1AP12319 257 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 SYN1P17600 705 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 SEC62Q99442 399 aaKnown RBP26.99■■□□□ 1.91
ACTN1-220ENST00000556433 FSD1Q9BTV5 496 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 ZNF287Q9HBT7 754 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 NYAP2Q9P242 653 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 PPP1R9AQ9ULJ8 1098 aa26.99■■□□□ 1.91
ACTN1-220ENST00000556433 ROBO3Q96MS0 1386 aa26.98■■□□□ 1.91
ACTN1-220ENST00000556433 VWA5AO00534 786 aa26.98■■□□□ 1.91
ACTN1-220ENST00000556433 CYBAP13498 195 aa26.98■■□□□ 1.91
ACTN1-220ENST00000556433 NACAP1Q9BZK3 213 aa26.98■■□□□ 1.91
ACTN1-220ENST00000556433 CLIP2Q9UDT6 1046 aa26.98■■□□□ 1.91
ACTN1-220ENST00000556433 ZBTB47Q9UFB7 747 aaPredicted RBP26.98■■□□□ 1.91
ACTN1-220ENST00000556433 F5H6K3 240 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 PRDM1O75626 825 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 MX1P20591 662 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 STAT3P40763 770 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 KLRC3Q07444 240 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 RIOX2Q8IUF8 465 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 CRBNQ96SW2 442 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 NUP88Q99567 741 aaPredicted RBP26.97■■□□□ 1.91
ACTN1-220ENST00000556433 GDF15Q99988 308 aa26.97■■□□□ 1.91
ACTN1-220ENST00000556433 SENP6Q9GZR1 1112 aaPredicted RBP26.97■■□□□ 1.91
ACTN1-220ENST00000556433 A0A0G2JMZ2 1700 aa26.96■■□□□ 1.91
ACTN1-220ENST00000556433 LRRC26Q2I0M4 334 aa26.96■■□□□ 1.91
ACTN1-220ENST00000556433 ANKRD45Q5TZF3 282 aa26.96■■□□□ 1.91
ACTN1-220ENST00000556433 MMP19Q99542 508 aa26.96■■□□□ 1.91
ACTN1-220ENST00000556433 NDUFB10O96000 172 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 BMP8BP34820 402 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 ZMYM1Q5SVZ6 1142 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 PRAMEF19Q5SWL8 479 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 MAML3Q96JK9 1138 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 SLF1Q9BQI6 1058 aa26.95■■□□□ 1.9
ACTN1-220ENST00000556433 IGKV6D-41A0A0C4DH26 115 aa26.94■■□□□ 1.9
ACTN1-220ENST00000556433 KCTD2Q14681 263 aa26.94■■□□□ 1.9
ACTN1-220ENST00000556433 REPS2Q8NFH8 660 aa26.94■■□□□ 1.9
ACTN1-220ENST00000556433 ZNF214Q9UL59 606 aaPredicted RBP26.94■■□□□ 1.9
ACTN1-220ENST00000556433 ANO1Q5XXA6 986 aa26.93■■□□□ 1.9
ACTN1-220ENST00000556433 ARRDC4Q8NCT1 418 aa26.93■■□□□ 1.9
ACTN1-220ENST00000556433 NAPBQ9H115 298 aa26.93■■□□□ 1.9
ACTN1-220ENST00000556433 ZNF236Q9UL36 1845 aa26.93■■□□□ 1.9
ACTN1-220ENST00000556433 RANBP2P49792 3224 aaKnown RBP26.92■■□□□ 1.9
ACTN1-220ENST00000556433 DNM1LO00429 736 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 SEPT4O43236 478 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 PGK2P07205 417 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 SLC3A2P08195 630 aaKnown RBP26.92■■□□□ 1.9
ACTN1-220ENST00000556433 COPB2P35606 906 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 MAGEA10P43363 369 aaPredicted RBP26.92■■□□□ 1.9
ACTN1-220ENST00000556433 PDE4BQ07343 736 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 GJC2Q5T442 439 aaPredicted RBP26.92■■□□□ 1.9
ACTN1-220ENST00000556433 MKL1Q969V6 931 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 CEP95Q96GE4 821 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 MTMR4Q9NYA4 1195 aa26.92■■□□□ 1.9
ACTN1-220ENST00000556433 PRPF38AQ8NAV1 312 aaKnown RBP26.91■■□□□ 1.9
ACTN1-220ENST00000556433 SALL3Q9BXA9 1300 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 TTLL1O95922 423 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 TSPY3P0CV98 308 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 TSPY8P0CW00 308 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 ATN1P54259 1190 aaPredicted RBP26.9■■□□□ 1.9
ACTN1-220ENST00000556433 PPARAQ07869 468 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 FAM47AQ5JRC9 791 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 NEDD1Q8NHV4 660 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 TEX13BQ9BXU2 312 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 GREB1LQ9C091 1923 aaPredicted RBP26.9■■□□□ 1.9
ACTN1-220ENST00000556433 PARP14Q460N5 1801 aa26.9■■□□□ 1.9
ACTN1-220ENST00000556433 SOX1O00570 391 aaPredicted RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 MYCNP04198 464 aaPredicted RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 TFAP4Q01664 338 aa26.89■■□□□ 1.9
ACTN1-220ENST00000556433 HDAC1Q13547 482 aaPredicted RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 ZNF792Q3KQV3 632 aa26.89■■□□□ 1.9
ACTN1-220ENST00000556433 CCDC129Q6ZRS4 1044 aa26.89■■□□□ 1.9
ACTN1-220ENST00000556433 LRRC47Q8N1G4 583 aaKnown RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 DIS3Q9Y2L1 958 aaKnown RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 CTDP1Q9Y5B0 961 aaPredicted RBP26.89■■□□□ 1.9
ACTN1-220ENST00000556433 ZBED4O75132 1171 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 SLC4A3P48751 1232 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 SNRNP48Q6IEG0 339 aaKnown RBP26.88■■□□□ 1.89
ACTN1-220ENST00000556433 KIFC2Q96AC6 838 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 EVI5LQ96CN4 794 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 TINF2Q9BSI4 451 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 UBE2OQ9C0C9 1292 aaKnown RBP26.88■■□□□ 1.89
ACTN1-220ENST00000556433 SYNPO2Q9UMS6 1093 aa26.88■■□□□ 1.89
ACTN1-220ENST00000556433 ZNFX1Q9P2E3 1918 aaKnown RBP26.87■■□□□ 1.89
ACTN1-220ENST00000556433 KBTBD13C9JR72 458 aa26.87■■□□□ 1.89
ACTN1-220ENST00000556433 CPXCR1Q8N123 301 aa26.87■■□□□ 1.89
ACTN1-220ENST00000556433 NRBP1Q9UHY1 535 aa26.87■■□□□ 1.89
ACTN1-220ENST00000556433 FEM1BQ9UK73 627 aa26.87■■□□□ 1.89
ACTN1-220ENST00000556433 RIPK3Q9Y572 518 aa26.87■■□□□ 1.89
ACTN1-220ENST00000556433 COL11A1P12107 1806 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms