RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
SLIRP-205ENST00000556310 RAD50Q92878 1312 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 SOX10P56693 466 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 SPICE1Q8N0Z3 855 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-205ENST00000556310 SYNPO2Q9UMS6 1093 aa13.69□□□□□ -0.22
SLIRP-205ENST00000556310 ORC4O43929 436 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 CNMDO75829 334 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 FGRP09769 529 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 FLT3LGP49771 235 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 RGS19P49795 217 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 IRF5Q13568 498 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 COG2Q14746 738 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 SLAIN1Q8ND83 568 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 GABRQQ9UN88 632 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
SLIRP-205ENST00000556310 BRCA2P51587 3418 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 PEX10O60683 326 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 GABBR2O75899 941 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 FLOT1O75955 427 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 TTLL1O95922 423 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 MAPK4P31152 587 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 GRK4P32298 578 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 CCNA1P78396 465 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 TFAP4Q01664 338 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 MKL1Q969V6 931 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
SLIRP-205ENST00000556310 NDUFB10O96000 172 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 PCP11498 1178 aaKnown RBP13.66□□□□□ -0.22
SLIRP-205ENST00000556310 Q3C1V9 767 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 PORCNQ9H237 461 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 IL25Q9H293 177 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 CLIP2Q9UDT6 1046 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
SLIRP-205ENST00000556310 F5H6K3 240 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 RAD21O60216 631 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 ADCY3O60266 1144 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
SLIRP-205ENST00000556310 NEFLP07196 543 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 CHMLP26374 656 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 HAND2P61296 217 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 KLRC3Q07444 240 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 GPR142Q7Z601 462 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
SLIRP-205ENST00000556310 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
SLIRP-205ENST00000556310 PXYLP1Q8TE99 480 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 RNF41Q9H4P4 317 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-205ENST00000556310 INCENPQ9NQS7 918 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
SLIRP-205ENST00000556310 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-205ENST00000556310 NT5C2P49902 561 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 AKNAD1Q5T1N1 836 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 PLEKHH3Q7Z736 793 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-205ENST00000556310 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 CWC22Q9HCG8 908 aaKnown RBP13.64□□□□□ -0.23
SLIRP-205ENST00000556310 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 CTNNA3Q9UI47 895 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
SLIRP-205ENST00000556310 ZNF213O14771 459 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 ELNP15502 786 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 NOVP48745 357 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 UBXN2AP68543 259 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
SLIRP-205ENST00000556310 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 SHCBP1Q8NEM2 672 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 NUDT12Q9BQG2 462 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 SLF1Q9BQI6 1058 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms