RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 ZBED3Q96IU2 234 aaPredicted RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 LZTS2Q9BRK4 669 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 GOLPH3LQ9H4A5 285 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 CABP5Q9NP86 173 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 SCAF8Q9UPN6 1271 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 COL2A1P02458 1487 aaPredicted RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 JAG1P78504 1218 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 SEPT2Q15019 361 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 SLC39A14Q15043 492 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 RBM26Q5T8P6 1007 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 TMEM39BQ9GZU3 492 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 VAT1LQ9HCJ6 419 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 GJA3Q9Y6H8 435 aa21.47■■□□□ 1.03
SDR39U1-218ENST00000556262 NLRP5P59047 1200 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 PTPAQ15257 358 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 CAMK4Q16566 473 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 NOM1Q5C9Z4 860 aaKnown RBP21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 TYW1BQ6NUM6 668 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 SPZ1Q9BXG8 430 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 RBSNQ9H1K0 784 aa21.46■■□□□ 1.03
SDR39U1-218ENST00000556262 FZD9O00144 591 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 SNHG28P0DPA3 235 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 EEF2P13639 858 aaKnown RBP21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 GMPSP49915 693 aaPredicted RBP21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.45■■□□□ 1.023e-31■■■■■ 27.4
SDR39U1-218ENST00000556262 MYO1BO43795 1136 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 LETM1O95202 739 aaPredicted RBP21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 ATP2B1P20020 1258 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 ABCB5Q2M3G0 1257 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 WWC2Q6AWC2 1192 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 ADALQ6DHV7 355 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 HOMER1Q86YM7 354 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 FHDC1Q9C0D6 1143 aaPredicted RBP21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 GPCPD1Q9NPB8 672 aa21.45■■□□□ 1.02
SDR39U1-218ENST00000556262 HEATR3Q7Z4Q2 680 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 SIAH1Q8IUQ4 282 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 FSIP1Q8NA03 581 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 TNFRSF25Q93038 417 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 PDLIM2Q96JY6 352 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 KANSL2Q9H9L4 492 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 PCDHB6Q9Y5E3 794 aa21.44■■□□□ 1.02
SDR39U1-218ENST00000556262 GH2P01242 217 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 ZNF280AP59817 542 aaPredicted RBP21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 RILPL1Q5EBL4 403 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 FKBP1CQ5VVH2 108 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 NUP62CLQ9H1M0 184 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 RAD21O60216 631 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 RPS12P25398 132 aaKnown RBP21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 ASPRV1Q53RT3 343 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 AXDND1Q5T1B0 1012 aaPredicted RBP21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 ARHGAP27Q6ZUM4 889 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 SAMD7Q7Z3H4 446 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 MICALL2Q8IY33 904 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 PIGSQ96S52 555 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 HERC5Q9UII4 1024 aaKnown RBP21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
SDR39U1-218ENST00000556262 A0A1B0GVL5 298 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 ICA1Q05084 483 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 ZNF543Q08ER8 600 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 SNW1Q13573 536 aaKnown RBP21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 TTBK2Q6IQ55 1244 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 SH3GLB2Q9NR46 395 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 DDX19AQ9NUU7 478 aaKnown RBP21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 BARHL2Q9NY43 387 aa21.42■■□□□ 1.02
SDR39U1-218ENST00000556262 STXBP3O00186 592 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 CCDC73Q6ZRK6 1079 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 KCTD1Q719H9 257 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 MIGA2Q7L4E1 593 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 FAM83AQ86UY5 434 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 MRPS27Q92552 414 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 MKL1Q969V6 931 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 RRP36Q96EU6 259 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 RIOX1Q9H6W3 641 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 NYAP2Q9P242 653 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 CNOT7Q9UIV1 285 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 A0A1W2PQ27 194 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 A0A1W2PQ64 194 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 A0A1W2PQD8 194 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 SMARCA1P28370 1054 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 TBC1D10BQ4KMP7 808 aaPredicted RBP21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 ENGASEQ8NFI3 743 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
SDR39U1-218ENST00000556262 WNT7AO00755 349 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 ASTN2O75129 1339 aaPredicted RBP21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 PPP6R2O75170 966 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 CCDC96Q2M329 555 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 PPP4R3BQ5MIZ7 849 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 CKAP2LQ8IYA6 745 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 CLIC6Q96NY7 704 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 TNMDQ9H2S6 317 aa21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 SEC63Q9UGP8 760 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-218ENST00000556262 CALML3P27482 149 aa21.39■■□□□ 1.02
SDR39U1-218ENST00000556262 SLC16A2P36021 539 aa21.39■■□□□ 1.02
SDR39U1-218ENST00000556262 NDUFA8P51970 172 aa21.39■■□□□ 1.02
SDR39U1-218ENST00000556262 FAM160A1Q05DH4 1040 aa21.39■■□□□ 1.02
SDR39U1-218ENST00000556262 PIK3AP1Q6ZUJ8 805 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms