RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 USP17L11C9JVI0 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L18D6R9N7 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L22D6RA61 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L17D6RBQ6 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L19D6RCP7 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L20D6RJB6 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 SPTLC1O15269 473 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 GH2P01242 217 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 SOX11P35716 441 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 PPP4CP60510 307 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 ATP2B2Q01814 1243 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L24Q0WX57 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 CCDC158Q5M9N0 1113 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 FAM109BQ6ICB4 259 aaPredicted RBP7.11□□□□□ -1.27
PRKCH-220ENST00000556164 POTEEQ6S8J3 1075 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 ATF7IPQ6VMQ6 1270 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 METTL3Q86U44 580 aaKnown RBP7.11□□□□□ -1.27
PRKCH-220ENST00000556164 METTL16Q86W50 562 aaKnown RBP7.11□□□□□ -1.27
PRKCH-220ENST00000556164 EDC3Q96F86 508 aaKnown RBP7.11□□□□□ -1.27
PRKCH-220ENST00000556164 ALG2Q9H553 416 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 FLRT1Q9NZU1 646 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
PRKCH-220ENST00000556164 RABGAP1Q9Y3P9 1069 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 PLXNA1Q9UIW2 1896 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 SLC15A5A6NIM6 579 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 POTEB2H3BUK9 544 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 DNM1LO00429 736 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 MSCO60682 206 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 CNMDO75829 334 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 GNAI2P04899 355 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 CYP2E1P05181 493 aaPredicted RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 VCAM1P19320 739 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 PTPREP23469 700 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 RARSP54136 660 aaKnown RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 RTP1P59025 263 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 DYNLL1P63167 89 aaKnown RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 OS9Q13438 667 aaPredicted RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 ELOAQ14241 798 aaKnown RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 RAB3GAP1Q15042 981 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 TNNI3KQ59H18 835 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 TRMT2AQ8IZ69 625 aaKnown RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 ZNF710Q8N1W2 664 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 NPLOC4Q8TAT6 608 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 UBXN4Q92575 508 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 LPAR1Q92633 364 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 C12orf42Q96LP6 360 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 DBNDD2Q9BQY9 259 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 ATP11BQ9Y2G3 1177 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 FPGT-TNNI3KV9GXZ4 949 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 COL11A1P12107 1806 aaPredicted RBP7.1□□□□□ -1.27
PRKCH-220ENST00000556164 PARP14Q460N5 1801 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 A0A0G2JMZ2 1700 aa7.1□□□□□ -1.27
PRKCH-220ENST00000556164 LAMA2P24043 3122 aaKnown RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 KBTBD13C9JR72 458 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 IDH1O75874 414 aaKnown RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 CYP7A1P22680 504 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 CYP2C19P33261 490 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 ZAP70P43403 619 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 USP5P45974 858 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 USP14P54578 494 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 EVX2Q03828 476 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 GRB14Q14449 540 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 ABCB5Q2M3G0 1257 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 GJC2Q5T442 439 aaPredicted RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 ANO1Q5XXA6 986 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 CATSPERGQ6ZRH7 1159 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 DPP9Q86TI2 863 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 MIGA1Q8NAN2 632 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 MAFAQ8NHW3 353 aaPredicted RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 ACER1Q8TDN7 264 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 ARHGAP45Q92619 1136 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 RPAP3Q9H6T3 665 aaPredicted RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 PIH1D3Q9NQM4 214 aaKnown RBP7.09□□□□□ -1.27
PRKCH-220ENST00000556164 BTBD7Q9P203 1132 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 SERPINB13Q9UIV8 391 aa7.09□□□□□ -1.27
PRKCH-220ENST00000556164 BAZ2AQ9UIF9 1905 aaKnown RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 IPO8O15397 1037 aaKnown RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 SMARCA5O60264 1052 aaPredicted RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 HOXC6P09630 235 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 CYBAP13498 195 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 TRIM27P14373 513 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 SF3A1Q15459 793 aaKnown RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 SHHQ15465 462 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 TRIM60Q495X7 471 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 CERKLQ49MI3 558 aaPredicted RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 C9orf50Q5SZB4 431 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 TATDN1Q6P1N9 297 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 LBX2Q6XYB7 198 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 MAGEB6Q8N7X4 407 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 TRPV1Q8NER1 839 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 FRAT1Q92837 279 aaPredicted RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 BADQ92934 168 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 CDX2Q99626 313 aaPredicted RBP7.08□□□□□ -1.28
PRKCH-220ENST00000556164 KIAA1683Q9H0B3 1180 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 EHD4Q9H223 541 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 GPR108Q9NPR9 543 aa7.08□□□□□ -1.28
PRKCH-220ENST00000556164 TNNQ9UQP3 1299 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms