RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PARK7Q99497 189 aaKnown RBP8.93□□□□□ -0.98
TDP1-214ENST00000556063 UPF3BQ9BZI7 483 aaKnown RBP8.93□□□□□ -0.98
TDP1-214ENST00000556063 TANGO6Q9C0B7 1094 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 EMILIN3Q9NT22 766 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 MTMR7Q9Y216 660 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 SLC12A7Q9Y666 1083 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 BTBD19C9JJ37 291 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 PDHXO00330 501 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 CA12O43570 354 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 ST18O60284 1047 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 PARP1P09874 1014 aaKnown RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 BMP3P12645 472 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 HOXA7P31268 230 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 GNAQP50148 359 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 NEK4P51957 841 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 IKQ13123 557 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 TAF1CQ15572 869 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 ASPRV1Q53RT3 343 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 GPATCH4Q5T3I0 446 aaKnown RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 Q6ZUG5 572 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 FAM160B2Q86V87 743 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 SGMS1Q86VZ5 419 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 ZNF654Q8IZM8 581 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 SPICE1Q8N0Z3 855 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 CTCFLQ8NI51 663 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 SMCR8Q8TEV9 937 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 GTF3C2Q8WUA4 911 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 CHMP4CQ96CF2 233 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 TCEANC2Q96MN5 208 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 LRRC2Q9BYS8 371 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 RPAP3Q9H6T3 665 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 LY9Q9HBG7 655 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 ZFYVE28Q9HCC9 887 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 HOXC10Q9NYD6 342 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 FEM1BQ9UK73 627 aa8.92□□□□□ -0.98
TDP1-214ENST00000556063 NAP1L2Q9ULW6 460 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 CTDP1Q9Y5B0 961 aaPredicted RBP8.92□□□□□ -0.98
TDP1-214ENST00000556063 MYPNQ86TC9 1320 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 CCDC196A0A1B0GTZ2 297 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 ZBTB43O43298 467 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 FLOT1O75955 427 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 FDX1P10109 184 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 PDHBP11177 359 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 CPA1P15085 419 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 GCLCP48506 637 aaPredicted RBP8.91□□□□□ -0.98
TDP1-214ENST00000556063 STAT2P52630 851 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 RCAN1P53805 252 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 COG2Q14746 738 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 PPP2R5BQ15173 497 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 FAM83BQ5T0W9 1011 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 GPAT2Q6NUI2 795 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 CATSPERGQ6ZRH7 1159 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 NUP133Q8WUM0 1156 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 BRF1Q92994 677 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 ZIC5Q96T25 663 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 MAP3K14Q99558 947 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 LZTS2Q9BRK4 669 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 AGXT2Q9BYV1 514 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 ASCC2Q9H1I8 757 aaPredicted RBP8.91□□□□□ -0.98
TDP1-214ENST00000556063 ALDH8A1Q9H2A2 487 aaPredicted RBP8.91□□□□□ -0.98
TDP1-214ENST00000556063 LOC285556D6RIA3 1793 aa8.91□□□□□ -0.98
TDP1-214ENST00000556063 KLF18A0A0U1RQI7 1052 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 TMEM232C9JQI7 657 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 IGF2BP3O00425 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
TDP1-214ENST00000556063 PLA2G6O60733 806 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 SNHG28P0DPA3 235 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 MCM2P49736 904 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 ZNF543Q08ER8 600 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 MOGSQ13724 837 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 GRM4Q14833 912 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 TREML2Q5T2D2 321 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 CPLX2Q6PUV4 134 aaKnown RBP8.9□□□□□ -0.98
TDP1-214ENST00000556063 APOA5Q6Q788 366 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 MB21D1Q8N884 522 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 PRPF38AQ8NAV1 312 aaKnown RBP8.9□□□□□ -0.98
TDP1-214ENST00000556063 PTPN18Q99952 460 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 SLF1Q9BQI6 1058 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 GPHNQ9NQX3 736 aaPredicted RBP8.9□□□□□ -0.98
TDP1-214ENST00000556063 RBM28Q9NW13 759 aaKnown RBP8.9□□□□□ -0.98
TDP1-214ENST00000556063 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 PNMA2Q9UL42 364 aa8.9□□□□□ -0.98
TDP1-214ENST00000556063 GOLGA8AA7E2F4 631 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 GOLGA8BA8MQT2 603 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 DHX16O60231 1041 aaKnown RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 ZBED4O75132 1171 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 SMARCA1P28370 1054 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 EVCP57679 992 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 APOBRQ0VD83 1088 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 TROAPQ12815 778 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 TRAF1Q13077 416 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 DGKZQ13574 1117 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 RTN1Q16799 776 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 SAMD1Q6SPF0 538 aaPredicted RBP8.89□□□□□ -0.99
TDP1-214ENST00000556063 KCTD1Q719H9 257 aa8.89□□□□□ -0.99
TDP1-214ENST00000556063 MICU3Q86XE3 530 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms