RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ATG4CQ96DT6 458 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 NACAP1Q9BZK3 213 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 PPP1R9AQ9ULJ8 1098 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 ROBO3Q96MS0 1386 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 CYP2D7A0A087X1C5 515 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 IGKV6D-41A0A0C4DH26 115 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 F5H6K3 240 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 VWA5AO00534 786 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 GPAA1O43292 621 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 RASA1P20936 1047 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 CNGA1P29973 690 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 CYP2C19P33261 490 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 KLRC3Q07444 240 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 C7orf61Q8IZ16 206 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 REPS2Q8NFH8 660 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 MAML3Q96JK9 1138 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 SENP6Q9GZR1 1112 aaPredicted RBP9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 ZNF214Q9UL59 606 aaPredicted RBP9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 DDX60LQ5H9U9 1706 aaKnown RBP9.3□□□□□ -0.92
PTCSC3-201ENST00000556013 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 CHGBP05060 677 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 SLC3A2P08195 630 aaKnown RBP9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 OAZ1P54368 228 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 PDE4BQ07343 736 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 PLS1Q14651 629 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 KCTD2Q14681 263 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 LRRC26Q2I0M4 334 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 ZNF792Q3KQV3 632 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 TDHQ8IZJ6 230 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 TRPV1Q8NER1 839 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 TINF2Q9BSI4 451 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 TEX13BQ9BXU2 312 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 ZMYND8Q9ULU4 1186 aaPredicted RBP9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 PCDHB15Q9Y5E8 787 aa9.29□□□□□ -0.92
PTCSC3-201ENST00000556013 NAV1Q8NEY1 1877 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 PLA2G6O60733 806 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 ZBED4O75132 1171 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 TTLL1O95922 423 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 APPP05067 770 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 MAGEA10P43363 369 aaPredicted RBP9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 TDO2P48775 406 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 SNX17Q15036 470 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 ZMYM1Q5SVZ6 1142 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 MAMDC4Q6UXC1 1216 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 SLC39A5Q6ZMH5 540 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 GMCL1P1Q8NEA9 526 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 PI4K2BQ8TCG2 481 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 MMP19Q99542 508 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 SLF1Q9BQI6 1058 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 TSEN34Q9BSV6 310 aaKnown RBP9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 CLIP2Q9UDT6 1046 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 FBXO40Q9UH90 709 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 RLFQ13129 1914 aa9.28□□□□□ -0.92
PTCSC3-201ENST00000556013 ZNF236Q9UL36 1845 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 DNAJC25-GNG10A0A024R161 153 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 KBTBD13C9JR72 458 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 NDUFB10O96000 172 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 RARBP10826 455 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 HDAC1Q13547 482 aaPredicted RBP9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 CLEC10AQ8IUN9 316 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 CHURC1Q8WUH1 139 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 EVI5LQ96CN4 794 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 LBHD1Q9BQE6 289 aaPredicted RBP9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 FBXO28Q9NVF7 368 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 LAMA3Q16787 3333 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 SYNGAP1Q96PV0 1343 aa9.27□□□□□ -0.93
PTCSC3-201ENST00000556013 FGRP09769 529 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 ZNF865P0CJ78 1059 aaPredicted RBP9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 TSPY3P0CV98 308 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 TSPY8P0CW00 308 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 AKR1A1P14550 325 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 SYN1P17600 705 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 MX1P20591 662 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 NOVP48745 357 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 NT5C2P49902 561 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 PPARAQ07869 468 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 LRRC41Q15345 812 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 ALX1Q15699 326 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 PRAMEF19Q5SWL8 479 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM109BQ6ICB4 259 aaPredicted RBP9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 RNF180Q86T96 592 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM160B2Q86V87 743 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 DDX11Q96FC9 970 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 CEP95Q96GE4 821 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 TOX2Q96NM4 488 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms