RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ASPRV1Q53RT3 343 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 MCTP1Q6DN14 999 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 AIFM3Q96NN9 605 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 LZTS2Q9BRK4 669 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 POTECB2RU33 542 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 UBE2Q2LH0YL09 131 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 CTNND1O60716 968 aaKnown RBP11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 FUT2Q10981 343 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 PRKG1Q13976 671 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 PNMA8AQ86V59 439 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 DCAF4Q8WV16 495 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 SH2D4AQ9H788 454 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 RRAGCQ9HB90 399 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 ATP6V1DQ9Y5K8 247 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 DOCK1Q14185 1865 aa11.18□□□□□ -0.62
HNRNPC-220ENST00000555585 F5H6K3 240 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 BAG4O95429 457 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 SNHG28P0DPA3 235 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 XBP1P17861 261 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 INPP5BP32019 993 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 NF2P35240 595 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 ECE1P42892 770 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 KLRC3Q07444 240 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 ZNF543Q08ER8 600 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 GPATCH4Q5T3I0 446 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 KRT40Q6A162 431 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 KCTD1Q719H9 257 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 CCDC84Q86UT8 332 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 ACER1Q8TDN7 264 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 UBA5Q9GZZ9 404 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 CPVLQ9H3G5 476 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 GOPCQ9HD26 462 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 GJB4Q9NTQ9 266 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 TMX2Q9Y320 296 aa11.17□□□□□ -0.62
HNRNPC-220ENST00000555585 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SCG2P13521 617 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SMARCA1P28370 1054 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SLC1A4P43007 532 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 RESTQ13127 1097 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 GNL2Q13823 731 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SAFBQ15424 915 aaKnown RBP eCLIP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 ZYXQ15942 572 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 PKN1Q16512 942 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 ZKSCAN4Q969J2 545 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 FEZ1Q99689 392 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SPZ1Q9BXG8 430 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 GLIS2Q9BZE0 524 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 ZSCAN16Q9H4T2 348 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SYNPO2Q9UMS6 1093 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 SSC5DA1L4H1 1573 aa11.16□□□□□ -0.62
HNRNPC-220ENST00000555585 PPP1R12BO60237 982 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 USP2O75604 605 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 NDUFB10O96000 172 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 BMP3P12645 472 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 NCLP19338 710 aaKnown RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 MCM4P33991 863 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 NBR1Q14596 966 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 PFKFB3Q16875 520 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 TTBK2Q6IQ55 1244 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 KLRG1Q96E93 195 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
HNRNPC-220ENST00000555585 VPS54Q9P1Q0 977 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms