RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 SLC4A4Q9Y6R1 1079 aa18.61■□□□□ 0.57
NEDD1-207ENST00000555114 MYH8P13535 1937 aa18.61■□□□□ 0.57
NEDD1-207ENST00000555114 POTEB2H3BUK9 544 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 RAD21O60216 631 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 EEF2P13639 858 aaKnown RBP18.6■□□□□ 0.57
NEDD1-207ENST00000555114 TMEM132BQ14DG7 1078 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 SNX17Q15036 470 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 LRRC41Q15345 812 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 RNF180Q86T96 592 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 SIAH1Q8IUQ4 282 aa18.6■□□□□ 0.57
NEDD1-207ENST00000555114 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
NEDD1-207ENST00000555114 DIS3Q9Y2L1 958 aaKnown RBP18.6■□□□□ 0.57
NEDD1-207ENST00000555114 STAT3P40763 770 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 ADCYAP1R1P41586 468 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 TRIM60Q495X7 471 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 PRAMEF19Q5SWL8 479 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 C1orf53Q5VUE5 145 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 RIOX2Q8IUF8 465 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 XPNPEP3Q9NQH7 507 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 RLFQ13129 1914 aa18.59■□□□□ 0.57
NEDD1-207ENST00000555114 CYP2D7A0A087X1C5 515 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 FAM47AQ5JRC9 791 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 SIRT2Q8IXJ6 389 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 MIER1Q8N108 512 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 TINF2Q9BSI4 451 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 LRRCC1Q9C099 1032 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 ADAMTS5Q9UNA0 930 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 COL6A3P12111 3177 aa18.58■□□□□ 0.56
NEDD1-207ENST00000555114 VWA5AO00534 786 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 AKR1A1P14550 325 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 SLFNL1Q499Z3 407 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 BADQ92934 168 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 FERMT2Q96AC1 680 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 PDLIM7Q9NR12 457 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 PHF24Q9UPV7 400 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
NEDD1-207ENST00000555114 FAM83BQ5T0W9 1011 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 FAM161BQ96MY7 647 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 GUCD1Q96NT3 240 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 MKNK2Q9HBH9 465 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 FBXO28Q9NVF7 368 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
NEDD1-207ENST00000555114 TACC3Q9Y6A5 838 aa18.56■□□□□ 0.56
NEDD1-207ENST00000555114 ROBO3Q96MS0 1386 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 BAZ2AQ9UIF9 1905 aaKnown RBP18.55■□□□□ 0.56
NEDD1-207ENST00000555114 PGK2P07205 417 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 SHHQ15465 462 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 ZNF792Q3KQV3 632 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
NEDD1-207ENST00000555114 MSL3Q8N5Y2 521 aaKnown RBP18.55■□□□□ 0.56
NEDD1-207ENST00000555114 GPATCH3Q96I76 525 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 SLF1Q9BQI6 1058 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 TEX13BQ9BXU2 312 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 ZNF287Q9HBT7 754 aa18.55■□□□□ 0.56
NEDD1-207ENST00000555114 LTBP2Q14767 1821 aa18.54■□□□□ 0.56
NEDD1-207ENST00000555114 CLTBP09497 229 aa18.54■□□□□ 0.56
NEDD1-207ENST00000555114 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
NEDD1-207ENST00000555114 TLE2Q04725 743 aa18.54■□□□□ 0.56
NEDD1-207ENST00000555114 GIMAP6Q6P9H5 292 aa18.54■□□□□ 0.56
NEDD1-207ENST00000555114 PUS7LQ9H0K6 701 aaKnown RBP18.54■□□□□ 0.56
NEDD1-207ENST00000555114 ZNF214Q9UL59 606 aaPredicted RBP18.54■□□□□ 0.56
NEDD1-207ENST00000555114 PGK1P00558 417 aa18.53■□□□□ 0.56
NEDD1-207ENST00000555114 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
NEDD1-207ENST00000555114 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
NEDD1-207ENST00000555114 NUP133Q8WUM0 1156 aa18.53■□□□□ 0.56
NEDD1-207ENST00000555114 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
NEDD1-207ENST00000555114 ECHDC1Q9NTX5 307 aa18.53■□□□□ 0.56
NEDD1-207ENST00000555114 PARP14Q460N5 1801 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 TRIM43BA6NCK2 446 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 SMIM22K7EJ46 135 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 ZBED4O75132 1171 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 RAG1P15918 1043 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 SNRNP48Q6IEG0 339 aaKnown RBP18.52■□□□□ 0.56
NEDD1-207ENST00000555114 PRPF38AQ8NAV1 312 aaKnown RBP18.52■□□□□ 0.56
NEDD1-207ENST00000555114 REPS2Q8NFH8 660 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 TRIM43Q96BQ3 446 aaPredicted RBP18.52■□□□□ 0.56
NEDD1-207ENST00000555114 STRBPQ96SI9 672 aaKnown RBP18.52■□□□□ 0.56
NEDD1-207ENST00000555114 TSEN34Q9BSV6 310 aaKnown RBP18.52■□□□□ 0.56
NEDD1-207ENST00000555114 NYAP2Q9P242 653 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
NEDD1-207ENST00000555114 SYNGAP1Q96PV0 1343 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 MYH7P12883 1935 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-207ENST00000555114 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 F5H6K3 240 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 PQBP1O60828 265 aaKnown RBP18.51■□□□□ 0.55
NEDD1-207ENST00000555114 CHGBP05060 677 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 ZNF865P0CJ78 1059 aaPredicted RBP18.51■□□□□ 0.55
NEDD1-207ENST00000555114 GNAT2P19087 354 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 KLRC3Q07444 240 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
NEDD1-207ENST00000555114 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
NEDD1-207ENST00000555114 STARD7Q9NQZ5 370 aa18.51■□□□□ 0.55
NEDD1-207ENST00000555114 MOXD2PA6NHM9 499 aa18.5■□□□□ 0.55
NEDD1-207ENST00000555114 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms