RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PLIN4Q96Q06 1357 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 CYP21A2P08686 494 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 CYP2C8P10632 490 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.41
TMEM260-206ENST00000555046 NECTIN1Q15223 517 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 RCSD1Q6JBY9 416 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
TMEM260-206ENST00000555046 TMTC2Q8N394 836 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 MB21D1Q8N884 522 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 RPAP3Q9H6T3 665 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-206ENST00000555046 ZSWIM5Q9P217 1185 aa12.46□□□□□ -0.41
TMEM260-206ENST00000555046 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 KDM4AO75164 1064 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
TMEM260-206ENST00000555046 FDX1P10109 184 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 MCCP23508 829 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 NOVP48745 357 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 CCNA1P78396 465 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 FAM110CQ1W6H9 321 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 Q7L0L9 218 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 ZSCAN10Q96SZ4 725 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-206ENST00000555046 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
TMEM260-206ENST00000555046 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 TANGO6Q9C0B7 1094 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 RABGAP1Q9Y3P9 1069 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 MYH1P12882 1939 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 MYH7P12883 1935 aa12.45□□□□□ -0.42
TMEM260-206ENST00000555046 A0A1W2PPC1 479 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 B4E1Z4 1266 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 E7EWF7 191 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 FLOT1O75955 427 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 SLC1A4P43007 532 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 PRMT2P55345 433 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 FCGRTP55899 365 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 HERVK_113P62684 666 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 CREB3L3Q68CJ9 461 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 SLFN13Q68D06 897 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 SPICE1Q8N0Z3 855 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 DEFB123Q8N688 67 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
TMEM260-206ENST00000555046 GMCL1Q96IK5 515 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 KAT14Q9H8E8 782 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
TMEM260-206ENST00000555046 CTDP1Q9Y5B0 961 aaPredicted RBP12.44□□□□□ -0.42
TMEM260-206ENST00000555046 SLC27A2O14975 620 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 PLA2G6O60733 806 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 BCRP11274 1271 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 BMP3P12645 472 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 MCM5P33992 734 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 LACTBP83111 547 aaPredicted RBP12.43□□□□□ -0.42
TMEM260-206ENST00000555046 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 DCAF4Q8WV16 495 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 PTPN22Q9Y2R2 807 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 FOCADQ5VW36 1801 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 LAMB1P07942 1786 aa12.43□□□□□ -0.42
TMEM260-206ENST00000555046 NEDD4P46934 1319 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
TMEM260-206ENST00000555046 NMT2O60551 498 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 ZBED4O75132 1171 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
TMEM260-206ENST00000555046 NDUFB10O96000 172 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 PSMA5P28066 241 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 FAM83BQ5T0W9 1011 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
TMEM260-206ENST00000555046 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 COA7Q96BR5 231 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 FAM122AQ96E09 287 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 TMEM47Q9BQJ4 181 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 MORF4L1Q9UBU8 362 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
TMEM260-206ENST00000555046 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
TMEM260-206ENST00000555046 MAPK4P31152 587 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 HSPA4P34932 840 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 COPB2P35606 906 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 PSMC4P43686 418 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
TMEM260-206ENST00000555046 GPATCH4Q5T3I0 446 aaKnown RBP12.41□□□□□ -0.42
TMEM260-206ENST00000555046 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
TMEM260-206ENST00000555046 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
TMEM260-206ENST00000555046 RBPJLQ9UBG7 517 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 PPP1R9AQ9ULJ8 1098 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
TMEM260-206ENST00000555046 TNKSO95271 1327 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms