RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RBL2Q08999 1139 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 NAA35Q5VZE5 725 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 NUTM2AQ8IVF1 878 aaPredicted RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 INCENPQ9NQS7 918 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 FAM217BQ9NTX9 383 aaPredicted RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 MYBL2P10244 700 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 PDHBP11177 359 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 GBP2P32456 591 aaPredicted RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 CYB5D1Q6P9G0 228 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 ENOX1Q8TC92 643 aaKnown RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 ACTR5Q9H9F9 607 aaPredicted RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 A0A1B0GTH6 734 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.4
SYNE3-203ENST00000554873 IARSP41252 1262 aaKnown RBP17.52■□□□□ 0.4
SYNE3-203ENST00000554873 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
SYNE3-203ENST00000554873 METTL24Q5JXM2 366 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 FAM228AQ86W67 206 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 FAM210AQ96ND0 272 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
SYNE3-203ENST00000554873 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
SYNE3-203ENST00000554873 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 EME2A4GXA9 379 aaPredicted RBP17.52■□□□□ 0.39
SYNE3-203ENST00000554873 ZBTB43O43298 467 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 ATF3P18847 181 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
SYNE3-203ENST00000554873 SPECC1Q5M775 1068 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 AENQ8WTP8 325 aaKnown RBP17.52■□□□□ 0.39
SYNE3-203ENST00000554873 EPN3Q9H201 632 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 BATF3Q9NR55 127 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.39
SYNE3-203ENST00000554873 MFAP3LO75121 409 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 ZMYND10O75800 440 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 ABL1P00519 1130 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 CCDC51Q96ER9 411 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 MMS19Q96T76 1030 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 PLA2G12BQ9BX93 195 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 KIF9Q9HAQ2 790 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 FECHP22830 423 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 CKAP4Q07065 602 aaKnown RBP17.51■□□□□ 0.39
SYNE3-203ENST00000554873 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
SYNE3-203ENST00000554873 RSRC1Q96IZ7 334 aaKnown RBP17.51■□□□□ 0.39
SYNE3-203ENST00000554873 CCDC114Q96M63 670 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 MYH7P12883 1935 aa17.51■□□□□ 0.39
SYNE3-203ENST00000554873 IDH1O75874 414 aaKnown RBP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 TRIM29Q14134 588 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 RBBP5Q15291 538 aaKnown RBP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 ZBTB38Q8NAP3 1195 aaPredicted RBP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 TMEM87BQ96K49 555 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 DACH1Q9UI36 760 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 GOLGA8AA7E2F4 631 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 SKAP2O75563 359 aaPredicted RBP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 KIRREL3Q8IZU9 778 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 CPLX3Q8WVH0 158 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 SCLT1Q96NL6 688 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 TPX2Q9ULW0 747 aaKnown RBP17.5■□□□□ 0.39
SYNE3-203ENST00000554873 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
SYNE3-203ENST00000554873 LSP1P33241 339 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 TMTC1Q8IUR5 882 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 CNGA4Q8IV77 575 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 KRI1Q8N9T8 703 aaKnown RBP17.49■□□□□ 0.39
SYNE3-203ENST00000554873 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 IFFO1Q0D2I5 559 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 TRAF1Q13077 416 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 TTMPQ5BVD1 217 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 TMEM67Q5HYA8 995 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 CDCA2Q69YH5 1023 aaPredicted RBP17.49■□□□□ 0.39
SYNE3-203ENST00000554873 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
SYNE3-203ENST00000554873 MLKLQ8NB16 471 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 SLC26A6Q9BXS9 759 aa17.49■□□□□ 0.39
SYNE3-203ENST00000554873 CPSF2Q9P2I0 782 aaKnown RBP17.49■□□□□ 0.39
SYNE3-203ENST00000554873 PARP4Q9UKK3 1724 aaKnown RBP17.49■□□□□ 0.39
SYNE3-203ENST00000554873 SNUPNO95149 360 aaKnown RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 GRIN1Q05586 938 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 IFT88Q13099 833 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 NKX1-1Q15270 411 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-203ENST00000554873 E2F5Q15329 346 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
SYNE3-203ENST00000554873 HOOK2Q96ED9 719 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms