RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 ZNF296Q8WUU4 475 aaPredicted RBP14.21□□□□□ -0.13
RIPK3-204ENST00000554756 LPAR1Q92633 364 aa14.21□□□□□ -0.13
RIPK3-204ENST00000554756 LAMA4Q16363 1823 aa14.21□□□□□ -0.14
RIPK3-204ENST00000554756 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
RIPK3-204ENST00000554756 FAM83BQ5T0W9 1011 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 SLFN13Q68D06 897 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 KCNB2Q92953 911 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 ZSCAN10Q96SZ4 725 aaPredicted RBP14.2□□□□□ -0.14
RIPK3-204ENST00000554756 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 LOC285556D6RIA3 1793 aa14.2□□□□□ -0.14
RIPK3-204ENST00000554756 WDR46O15213 610 aaKnown RBP14.19□□□□□ -0.14
RIPK3-204ENST00000554756 PEX10O60683 326 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 FKTNO75072 461 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 NOVP48745 357 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 RCSD1Q6JBY9 416 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 C17orf99Q6UX52 265 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 TMX3Q96JJ7 454 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 PTPRFP10586 1907 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 TOP1P11387 765 aaKnown RBP14.19□□□□□ -0.14
RIPK3-204ENST00000554756 NT5C2P49902 561 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 HERVK_113P62684 666 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 SP3Q02447 781 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 COL9A3Q14050 684 aaPredicted RBP14.19□□□□□ -0.14
RIPK3-204ENST00000554756 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 MB21D2Q8IYB1 491 aaPredicted RBP14.19□□□□□ -0.14
RIPK3-204ENST00000554756 ANKRD13CQ8N6S4 541 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 SYNPO2Q9UMS6 1093 aa14.19□□□□□ -0.14
RIPK3-204ENST00000554756 TNKSO95271 1327 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 FLOT1O75955 427 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
RIPK3-204ENST00000554756 CCDC178Q5BJE1 867 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 ENAHQ8N8S7 591 aaPredicted RBP14.18□□□□□ -0.14
RIPK3-204ENST00000554756 CD99L2Q8TCZ2 262 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 TTC14Q96N46 770 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 PAGR1Q9BTK6 254 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
RIPK3-204ENST00000554756 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
RIPK3-204ENST00000554756 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
RIPK3-204ENST00000554756 BCRP11274 1271 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 ANTXR2P58335 489 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 COG2Q14746 738 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 ADCK5Q3MIX3 580 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 NOM1Q5C9Z4 860 aaKnown RBP14.17□□□□□ -0.14
RIPK3-204ENST00000554756 DGKHQ86XP1 1220 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 KAT14Q9H8E8 782 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
RIPK3-204ENST00000554756 PRC1O43663 620 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 BMP3P12645 472 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 SLC1A4P43007 532 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 GCLCP48506 637 aaPredicted RBP14.17□□□□□ -0.14
RIPK3-204ENST00000554756 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 TXNRD2Q9NNW7 524 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 SNX14Q9Y5W7 946 aa14.17□□□□□ -0.14
RIPK3-204ENST00000554756 DSG3P32926 999 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 SEC23AQ15436 765 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
RIPK3-204ENST00000554756 KCTD1Q719H9 257 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 ARHGAP39Q9C0H5 1083 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 SENP2Q9HC62 589 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 GPHNQ9NQX3 736 aaPredicted RBP14.16□□□□□ -0.14
RIPK3-204ENST00000554756 HOXC10Q9NYD6 342 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 RBPJLQ9UBG7 517 aa14.16□□□□□ -0.14
RIPK3-204ENST00000554756 FRMPD2Q68DX3 1309 aaPredicted RBP14.16□□□□□ -0.14
RIPK3-204ENST00000554756 ERICH2A1L162 156 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 GOLGA6L3A6NEY3 463 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 PDIA4P13667 645 aaKnown RBP14.15□□□□□ -0.14
RIPK3-204ENST00000554756 MCM5P33992 734 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 LACTBP83111 547 aaPredicted RBP14.15□□□□□ -0.14
RIPK3-204ENST00000554756 CAP1Q01518 475 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 IKQ13123 557 aaPredicted RBP14.15□□□□□ -0.14
RIPK3-204ENST00000554756 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 TSGA10IPQ3SY00 556 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 ERO1AQ96HE7 468 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 LRRC2Q9BYS8 371 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 GPCPD1Q9NPB8 672 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
RIPK3-204ENST00000554756 CNMDO75829 334 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 KRT32Q14532 448 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 KIF22Q14807 665 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 WTAPQ15007 396 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 SART3Q15020 963 aaKnown RBP14.14□□□□□ -0.15
RIPK3-204ENST00000554756 FAM110CQ1W6H9 321 aa14.14□□□□□ -0.15
RIPK3-204ENST00000554756 Q3C1V9 767 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms