RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PSMD14O00487 310 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 PRMT3O60678 531 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 RARAP10276 462 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 FKBP1BP68106 108 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 GPLD1P80108 840 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 ELOAQ14241 798 aaKnown RBP6.37□□□□□ -1.39
ATXN3-229ENST00000554672 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-229ENST00000554672 NOM1Q5C9Z4 860 aaKnown RBP6.37□□□□□ -1.39
ATXN3-229ENST00000554672 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
ATXN3-229ENST00000554672 TMC4Q7Z404 712 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 FMR1NBQ8N0W7 255 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-229ENST00000554672 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 FRRS1LQ9P0K9 344 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 LTBP1Q14766 1721 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 MYL6BP14649 208 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 RAC1P63000 192 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 GRAPQ13588 217 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 PCSK7Q16549 785 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 SWI5Q1ZZU3 235 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 HFE2Q6ZVN8 426 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 ETFBKMTQ8IXQ9 262 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 RGL4Q8IZJ4 473 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 CMTR1Q8N1G2 835 aaKnown RBP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 TTC9Q92623 222 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 CFAP53Q96M91 514 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 TLR7Q9NYK1 1049 aaKnown RBP6.36□□□□□ -1.39
ATXN3-229ENST00000554672 SCN7AQ01118 1682 aa6.36□□□□□ -1.39
ATXN3-229ENST00000554672 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 XYLBO75191 536 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 NRLP54845 237 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-229ENST00000554672 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-229ENST00000554672 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 CLSPNQ9HAW4 1339 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 J3QW42 95 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 MMP20O60882 483 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 FKTNO75072 461 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 DEAF1O75398 565 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-229ENST00000554672 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-229ENST00000554672 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-229ENST00000554672 TRIP4Q15650 581 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-229ENST00000554672 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 ZMYM1Q5SVZ6 1142 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 ELMSAN1Q6PJG2 1045 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 TXNRD3Q86VQ6 643 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 FBXO11Q86XK2 927 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 EYA3Q99504 573 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.39
ATXN3-229ENST00000554672 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-229ENST00000554672 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ECE2O60344 883 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ATG7O95352 703 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 NRG1Q02297 640 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 PRSS36Q5K4E3 855 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 DTWD1Q8N5C7 304 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 CXXC1Q9P0U4 656 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ARFGEF2Q9Y6D5 1785 aa6.33□□□□□ -1.4
ATXN3-229ENST00000554672 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-229ENST00000554672 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 NEFMP07197 916 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-229ENST00000554672 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 GPSM2P81274 684 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ATXN3-229ENST00000554672 TMEM164Q5U3C3 297 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 C16orf46Q6P387 395 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 COL26A1Q96A83 441 aa6.32□□□□□ -1.4
ATXN3-229ENST00000554672 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms