RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SOS2Q07890 1332 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-207ENST00000554439 CCDC171Q6TFL3 1326 aa2.99□□□□□ -1.93
PRPF39-207ENST00000554439 ARHGEF10O15013 1369 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ITSN1Q15811 1721 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 OVOS2A0A0J9YW53 1432 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 OVOS2Q6IE36 1432 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CCDC69A6NI79 296 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GNAT3A8MTJ3 354 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GLRX3O76003 335 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 PTGIRP43119 386 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CCZ1BP86790 482 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CCZ1P86791 482 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GABPB1Q06547 395 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SERINC3Q13530 473 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 IQCB1Q15051 598 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 PTPN14Q15678 1187 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 RBM43Q6ZSC3 357 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 KRT222Q8N1A0 295 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 KLHDC4Q8TBB5 520 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZBTB9Q96C00 473 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ITPKCQ96DU7 683 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GMCL1Q96IK5 515 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZSCAN31Q96LW9 406 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 AGBL1Q96MI9 1066 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CCDC8Q9H0W5 538 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CHRDQ9H2X0 955 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 BOLA2Q9H3K6 86 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 FAM8A1Q9UBU6 413 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 A2ML1A8K2U0 1454 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ELP1O95163 1332 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ADCY9O60503 1353 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SETD1BQ9UPS6 1966 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GOLGA6L19H0YKK7 550 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 TGFBR3LH3BV60 316 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 EPB41L2O43491 1005 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 USP17L7P0C7H9 530 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZKSCAN1P17029 563 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 INPP5BP32019 993 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 AMPHP49418 695 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NNTQ13423 1086 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SYCP1Q15431 976 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 PTPN21Q16825 1174 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ERCC6LQ2NKX8 1250 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CWF19L2Q2TBE0 894 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 RNFT1Q5M7Z0 435 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 BEND3Q5T5X7 828 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GORABQ5T7V8 394 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NXPE4Q6UWF7 544 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CCDC129Q6ZRS4 1044 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 AACSQ86V21 672 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 DHX40Q8IX18 779 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CLASRPQ8N2M8 674 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZNF397Q8NF99 534 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 RHBDD1Q8TEB9 315 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 RUFY2Q8WXA3 655 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 MAP4K1Q92918 833 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 KCNB2Q92953 911 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 BRF1Q92994 677 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SUSD3Q96L08 255 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZSCAN10Q96SZ4 725 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.98□□□□□ -1.934e-8■■■■□ 20.1
PRPF39-207ENST00000554439 CHMP4AQ9BY43 222 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NIFKQ9BYG3 293 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 TM6SF1Q9BZW5 370 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 GRIP2Q9C0E4 1043 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SCAND2PQ9GZW5 306 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 SIL1Q9H173 461 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ZFYVE28Q9HCC9 887 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NPHS2Q9NP85 383 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 DDX19AQ9NUU7 478 aaKnown RBP2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NPHP3Q7Z494 1330 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 COL15A1P39059 1388 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 MAP3K5Q99683 1374 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 ROBO2Q9HCK4 1378 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 NRXN3Q9Y4C0 1643 aa2.98□□□□□ -1.93
PRPF39-207ENST00000554439 CRYBG1Q9Y4K1 1723 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 PRAMEF22A3QJZ6 481 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 GIPC1O14908 333 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 CAPN2P17655 700 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 RPS6KB1P23443 525 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 GUCY1B3Q02153 619 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 RESTQ13127 1097 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 PROSER3Q2NL68 480 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 BLOC1S2Q6QNY1 142 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 SYT10Q6XYQ8 523 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-207ENST00000554439 CCAR1Q8IX12 1150 aaKnown RBP2.97□□□□□ -1.93
PRPF39-207ENST00000554439 CCAR2Q8N163 923 aaKnown RBP2.97□□□□□ -1.93
PRPF39-207ENST00000554439 AOPEPQ8N6M6 819 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 GLIS3Q8NEA6 775 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 DNAAF4Q8WXU2 420 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 EAF2Q96CJ1 260 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-207ENST00000554439 GPRASP2Q96D09 838 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 HSH2DQ96JZ2 352 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 SEC62Q99442 399 aaKnown RBP2.97□□□□□ -1.93
PRPF39-207ENST00000554439 EPC1Q9H2F5 836 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 LGR6Q9HBX8 967 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 ECHDC1Q9NTX5 307 aa2.97□□□□□ -1.93
PRPF39-207ENST00000554439 FAM53CQ9NYF3 392 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms