RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 TACC3Q9Y6A5 838 aa9.85□□□□□ -0.83
ACTN1-212ENST00000554158 MCM3APO60318 1980 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 RAG1P15918 1043 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 SHMT1P34896 483 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 COPB2P35606 906 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 PLCD1P51178 756 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 KCTD2Q14681 263 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 LRRC41Q15345 812 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 SLC9C2Q5TAH2 1124 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 CCDC174Q6PII3 467 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 ABRAQ8N0Z2 381 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 TRPV1Q8NER1 839 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 CNPY2Q9Y2B0 182 aa9.84□□□□□ -0.83
ACTN1-212ENST00000554158 UNC80Q8N2C7 3258 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 WDR46O15213 610 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 PQBP1O60828 265 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 CLTBP09497 229 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 IFIT2P09913 472 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 ICA1Q05084 483 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 PRAMEF19Q5SWL8 479 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 C9orf50Q5SZB4 431 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 POTEEQ6S8J3 1075 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 SPICE1Q8N0Z3 855 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 CLASRPQ8N2M8 674 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 NUP133Q8WUM0 1156 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 MYLIPQ8WY64 445 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 EAF2Q96CJ1 260 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 MAML3Q96JK9 1138 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 GOPCQ9HD26 462 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 PDLIM7Q9NR12 457 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 TMEM39AQ9NV64 488 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 TLR7Q9NYK1 1049 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 NRBP1Q9UHY1 535 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
ACTN1-212ENST00000554158 NOP58Q9Y2X3 529 aaKnown RBP9.83□□□□□ -0.84
ACTN1-212ENST00000554158 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 COBLO75128 1261 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 AKR1A1P14550 325 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 PDE6AP16499 860 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 TLE2Q04725 743 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 FPGSQ05932 587 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 SNX17Q15036 470 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 FAM47AQ5JRC9 791 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 C1orf53Q5VUE5 145 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 VTI1AQ96AJ9 217 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 ATG4CQ96DT6 458 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 CCDC17Q96LX7 622 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 SPC25Q9HBM1 224 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 EXOC6BQ9Y2D4 811 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 ZNF532Q9HCE3 1301 aa9.82□□□□□ -0.84
ACTN1-212ENST00000554158 CCER2I3L3R5 266 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 APBB1O00213 710 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 GOLIM4O00461 696 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 HMMRO75330 724 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 PGK1P00558 417 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 PYGBP11216 843 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 GUCY1A2P33402 732 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 CCDC129Q6ZRS4 1044 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-212ENST00000554158 SDR42E1Q8WUS8 393 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 DDX11Q96FC9 970 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 GAS2L1Q99501 681 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-212ENST00000554158 RIOK1Q9BRS2 568 aaKnown RBP9.81□□□□□ -0.84
ACTN1-212ENST00000554158 TINF2Q9BSI4 451 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 VCPKMTQ9H867 229 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 STARD7Q9NQZ5 370 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 ATP8A2Q9NTI2 1148 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 PHF24Q9UPV7 400 aa9.81□□□□□ -0.84
ACTN1-212ENST00000554158 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 A0A1W2PRG0 241 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 TRIM43BA6NCK2 446 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 PGK2P07205 417 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 STAT3P40763 770 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 SLC4A3P48751 1232 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 GABPAQ06546 454 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 SH3RF1Q7Z6J0 888 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 SLC44A5Q8NCS7 719 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 TRIM43Q96BQ3 446 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 KANSL2Q9H9L4 492 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 IL1RAPL2Q9NP60 686 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 DCP1AQ9NPI6 582 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 DIS3Q9Y2L1 958 aaKnown RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 TMX2Q9Y320 296 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 GBF1Q92538 1859 aa9.8□□□□□ -0.84
ACTN1-212ENST00000554158 LAMA2P24043 3122 aaKnown RBP9.8□□□□□ -0.84
ACTN1-212ENST00000554158 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-212ENST00000554158 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
ACTN1-212ENST00000554158 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
ACTN1-212ENST00000554158 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
ACTN1-212ENST00000554158 MS4A1P11836 297 aa9.79□□□□□ -0.84
ACTN1-212ENST00000554158 AKR1B1P15121 316 aa9.79□□□□□ -0.84
ACTN1-212ENST00000554158 PPIGQ13427 754 aaKnown RBP eCLIP9.79□□□□□ -0.842e-15■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms