RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 DCAF4Q8WV16 495 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 ANKS1AQ92625 1134 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
TUBB3-202ENST00000553656 MTA3Q9BTC8 594 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
TUBB3-202ENST00000553656 HOXC10Q9NYD6 342 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 CPA4Q9UI42 421 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 FKTNO75072 461 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 ANTXR2P58335 489 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
TUBB3-202ENST00000553656 R3HDMLQ9H3Y0 253 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
TUBB3-202ENST00000553656 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 WDR19Q8NEZ3 1342 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 ADGRA2Q96PE1 1338 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 STAT2P52630 851 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 SP3Q02447 781 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 KIF22Q14807 665 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 SEC23AQ15436 765 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 C17orf99Q6UX52 265 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 TMTC2Q8N394 836 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 ERO1AQ96HE7 468 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 PAGR1Q9BTK6 254 aa16.21■□□□□ 0.19
TUBB3-202ENST00000553656 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-202ENST00000553656 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-202ENST00000553656 SEC24BO95487 1268 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 PDHBP11177 359 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
TUBB3-202ENST00000553656 ANAPC15P60006 121 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 FAM160B2Q86V87 743 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
TUBB3-202ENST00000553656 MB21D1Q8N884 522 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-202ENST00000553656 FBXO28Q9NVF7 368 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 PPP1R9AQ9ULJ8 1098 aa16.2■□□□□ 0.18
TUBB3-202ENST00000553656 FRMPD2Q68DX3 1309 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-202ENST00000553656 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-202ENST00000553656 BCRP11274 1271 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 DSG3P32926 999 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
TUBB3-202ENST00000553656 LBX2Q6XYB7 198 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 PRPF38AQ8NAV1 312 aaKnown RBP16.19■□□□□ 0.18
TUBB3-202ENST00000553656 GPRC5AQ8NFJ5 357 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 IGDCC4Q8TDY8 1250 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 KIFC2Q96AC6 838 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
TUBB3-202ENST00000553656 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
TUBB3-202ENST00000553656 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 LIFRP42702 1097 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 CCNA1P78396 465 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 ATG4CQ96DT6 458 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 TM6SF1Q9BZW5 370 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
TUBB3-202ENST00000553656 GPCPD1Q9NPB8 672 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 CYP46A1Q9Y6A2 500 aa16.18■□□□□ 0.18
TUBB3-202ENST00000553656 PLA2G6O60733 806 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 ZBED4O75132 1171 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 FCGRTP55899 365 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 ERVK-9P63128 1117 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 ERVK-24P63145 666 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-202ENST00000553656 EXOSC10Q01780 885 aaKnown RBP16.17■□□□□ 0.18
TUBB3-202ENST00000553656 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
TUBB3-202ENST00000553656 RBPJLQ9UBG7 517 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
TUBB3-202ENST00000553656 VWA5AO00534 786 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 DDAH1O94760 285 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CALM1P0DP23 149 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CALM2P0DP24 149 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CALM3P0DP25 149 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 FDX1P10109 184 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CPA1P15085 419 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 PLS1Q14651 629 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CTCFLQ8NI51 663 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-202ENST00000553656 CD99L2Q8TCZ2 262 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms