RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 PAK6Q9NQU5 681 aaPredicted RBP13.82□□□□□ -0.2
CCNK-202ENST00000553636 HELLSQ9NRZ9 838 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 ZNF236Q9UL36 1845 aa13.82□□□□□ -0.2
CCNK-202ENST00000553636 IGKV6D-41A0A0C4DH26 115 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 FARP2O94887 1054 aaPredicted RBP13.81□□□□□ -0.2
CCNK-202ENST00000553636 TSPY3P0CV98 308 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 TSPY8P0CW00 308 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
CCNK-202ENST00000553636 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
CCNK-202ENST00000553636 CTDSPL2Q05D32 466 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
CCNK-202ENST00000553636 MB21D1Q8N884 522 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 HMX1Q9NP08 348 aaPredicted RBP13.81□□□□□ -0.2
CCNK-202ENST00000553636 NYAP2Q9P242 653 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
CCNK-202ENST00000553636 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 F5H6K3 240 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 NDUFB10O96000 172 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 TFRCP02786 760 aaKnown RBP13.8□□□□□ -0.2
CCNK-202ENST00000553636 TFAP4Q01664 338 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 KLRC3Q07444 240 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 GRB14Q14449 540 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 ZNF589Q86UQ0 364 aaPredicted RBP13.8□□□□□ -0.2
CCNK-202ENST00000553636 NCAPG2Q86XI2 1143 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 TRMT44Q8IYL2 757 aaKnown RBP13.8□□□□□ -0.2
CCNK-202ENST00000553636 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 OSBPL3Q9H4L5 887 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
CCNK-202ENST00000553636 FRMPD3Q5JV73 1810 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 ERCC3P19447 782 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 TMEM132BQ14DG7 1078 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
CCNK-202ENST00000553636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCNK-202ENST00000553636 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 TTLL1O95922 423 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 SDSP20132 328 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 ADORA2AP29274 412 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
CCNK-202ENST00000553636 ALX1Q15699 326 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 CRISPLD2Q9H0B8 497 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 MROH8Q9H579 483 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
CCNK-202ENST00000553636 ISY1Q9ULR0 285 aaKnown RBP13.78□□□□□ -0.2
CCNK-202ENST00000553636 TSPY2A6NKD2 308 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 VWA5AO00534 786 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
CCNK-202ENST00000553636 FGAP02671 866 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
CCNK-202ENST00000553636 PDE4AP27815 886 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
CCNK-202ENST00000553636 HAND2P61296 217 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
CCNK-202ENST00000553636 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 CHMP4CQ96CF2 233 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 TOMM22Q9NS69 142 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.21
CCNK-202ENST00000553636 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
CCNK-202ENST00000553636 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 STRNO43815 780 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 NMT2O60551 498 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 HOXC6P09630 235 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 MFSD14CQ5VZR4 134 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 SLFN13Q68D06 897 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 CWC27Q6UX04 472 aaKnown RBP13.76□□□□□ -0.21
CCNK-202ENST00000553636 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 DIS3LQ8TF46 1054 aaKnown RBP13.76□□□□□ -0.21
CCNK-202ENST00000553636 DPF3Q92784 378 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 MKL1Q969V6 931 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
CCNK-202ENST00000553636 MKI67P46013 3256 aaKnown RBP13.76□□□□□ -0.21
CCNK-202ENST00000553636 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
CCNK-202ENST00000553636 ZMYM6O95789 1325 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 ORC4O43929 436 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 COBLO75128 1261 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 SLC25A27O95847 323 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 FCER1AP12319 257 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 CYP2C19P33261 490 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 STAT3P40763 770 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
CCNK-202ENST00000553636 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
CCNK-202ENST00000553636 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms