RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.37□□□□□ -1.55
TDP1-207ENST00000553617 CNGA1P29973 690 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 SOX5P35711 763 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 ASPAP45381 313 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 RNF4P78317 190 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 AUHQ13825 339 aaKnown RBP5.37□□□□□ -1.55
TDP1-207ENST00000553617 CCDC181Q5TID7 509 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 ANKRD34AQ69YU3 496 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 FERMT3Q86UX7 667 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 LRRTM3Q86VH5 581 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 DDX42Q86XP3 938 aaKnown RBP eCLIP5.37□□□□□ -1.55
TDP1-207ENST00000553617 TMEM130Q8N3G9 435 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 ARHGEF39Q8N4T4 335 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 XAGE3Q8WTP9 111 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 KREMEN1Q96MU8 473 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
TDP1-207ENST00000553617 ACSS3Q9H6R3 686 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 RRAGCQ9HB90 399 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 TRIM39Q9HCM9 518 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 GP6Q9HCN6 339 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 CHPF2Q9P2E5 772 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 LRP2BPQ9P2M1 347 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 MAGEC2Q9UBF1 373 aaPredicted RBP5.37□□□□□ -1.55
TDP1-207ENST00000553617 PCOLCE2Q9UKZ9 415 aa5.37□□□□□ -1.55
TDP1-207ENST00000553617 A0A087WZG4 1122 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 F8W735 103 aaPredicted RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 PRODHO43272 600 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 RNGTTO60942 597 aaKnown RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 PPM1BO75688 479 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 DNAJC8O75937 253 aaPredicted RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 ELNP15502 786 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 POU3F2P20265 443 aaPredicted RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 PMLP29590 882 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 EVA1CP58658 441 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 EXOSC10Q01780 885 aaKnown RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 MAP7Q14244 749 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 FDX2Q6P4F2 183 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 NSMFQ6X4W1 530 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 Q6ZS46 218 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
TDP1-207ENST00000553617 C12orf50Q8NA57 414 aaPredicted RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 GSTCDQ8NEC7 633 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 RNF141Q8WVD5 230 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 FBXL18Q96ME1 805 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 IPO9Q96P70 1041 aaKnown RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 PSMG3-AS1Q96PY0 264 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 CHMP4AQ9BY43 222 aa5.36□□□□□ -1.55
TDP1-207ENST00000553617 CGGBP1Q9UFW8 167 aaPredicted RBP5.36□□□□□ -1.55
TDP1-207ENST00000553617 DLX3O60479 287 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 SLITRK5O94991 958 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 EYA4O95677 639 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 ITGA4P13612 1032 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 PREPP48147 710 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 ZNF445P59923 1031 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 NFKB2Q00653 900 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 NBPF9Q3BBW0 867 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 BRDTQ58F21 947 aaPredicted RBP5.35□□□□□ -1.55
TDP1-207ENST00000553617 LETMD1Q6P1Q0 360 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 AGGF1Q8N302 714 aaeCLIP5.35□□□□□ -1.55
TDP1-207ENST00000553617 RIN3Q8TB24 985 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 SLC7A14Q8TBB6 771 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 BTN2A2Q8WVV5 523 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 DDX1Q92499 740 aaKnown RBP5.35□□□□□ -1.55
TDP1-207ENST00000553617 PPP1R14AQ96A00 147 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 PLVAPQ9BX97 442 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 ASPNQ9BXN1 380 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 SLC52A2Q9HAB3 445 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 PRR13Q9NZ81 148 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 SFMBT1Q9UHJ3 866 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 AKT3Q9Y243 479 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 THRAP3Q9Y2W1 955 aaKnown RBP5.35□□□□□ -1.55
TDP1-207ENST00000553617 SUGT1Q9Y2Z0 365 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 FHOD1Q9Y613 1164 aa5.35□□□□□ -1.55
TDP1-207ENST00000553617 ALG1L2C9J202 215 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 RBAK-RBAKDNI3L0D1 243 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 NOP56O00567 594 aaKnown RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 GFRA1P56159 465 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 GABREP78334 506 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 NTRK3Q16288 839 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 ODR4Q5SWX8 454 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 POMZP3Q6PJE2 187 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 ADAT2Q7Z6V5 191 aaKnown RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 UBR7Q8N806 425 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 NEDD1Q8NHV4 660 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 SYTL5Q8TDW5 730 aaPredicted RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 EZH1Q92800 747 aaPredicted RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 C1orf159Q96HA4 380 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 MIPEPQ99797 713 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 NKX2-4Q9H2Z4 354 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 SSU72Q9NP77 194 aaKnown RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 ENAMQ9NRM1 1142 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 MCM8Q9UJA3 840 aa5.34□□□□□ -1.55
TDP1-207ENST00000553617 G3BP2Q9UN86 482 aaKnown RBP5.34□□□□□ -1.55
TDP1-207ENST00000553617 GNB5O14775 395 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 EFCAB14O75071 495 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 NPTXRO95502 500 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 SCG5P05408 212 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 ETV3P41162 512 aa5.33□□□□□ -1.56
TDP1-207ENST00000553617 CYP4F3Q08477 520 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms