RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 FZD1Q9UP38 647 aa15.92■□□□□ 0.14
APEX1-205ENST00000553555 hCG_1642624A0A1W2PR95 340 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
APEX1-205ENST00000553555 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 KRT40Q6A162 431 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 SCYL3Q8IZE3 742 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 GMCL1Q96IK5 515 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 GBP4Q96PP9 640 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 WRNIP1Q96S55 665 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 RIOX1Q9H6W3 641 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 GPCPD1Q9NPB8 672 aa15.91■□□□□ 0.14
APEX1-205ENST00000553555 RAD21O60216 631 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 NDUFB10O96000 172 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 VEGFAP15692 232 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 SLC1A4P43007 532 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 RESTQ13127 1097 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 ZKSCAN4Q969J2 545 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 CDCA5Q96FF9 252 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 UBA5Q9GZZ9 404 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 CPVLQ9H3G5 476 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 ZSCAN16Q9H4T2 348 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 SCG2P13521 617 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 PRKG1Q13976 671 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 TRIM29Q14134 588 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 CCDC96Q2M329 555 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 NOL9Q5SY16 702 aaKnown RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 GLIS2Q9BZE0 524 aaPredicted RBP15.9■□□□□ 0.14
APEX1-205ENST00000553555 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
APEX1-205ENST00000553555 OTOFQ9HC10 1997 aa15.89■□□□□ 0.14
APEX1-205ENST00000553555 PAPPA2Q9BXP8 1791 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
APEX1-205ENST00000553555 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 MCM4P33991 863 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 KIAA1755Q5JYT7 1200 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 MCTP1Q6DN14 999 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.89■□□□□ 0.13
APEX1-205ENST00000553555 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 VAT1LQ9HCJ6 419 aa15.89■□□□□ 0.13
APEX1-205ENST00000553555 BMP3P12645 472 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 XBP1P17861 261 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 PTPRAP18433 802 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 NF2P35240 595 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 SHISA4Q96DD7 197 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 RRP36Q96EU6 259 aaKnown RBP15.88■□□□□ 0.13
APEX1-205ENST00000553555 CHAMP1Q96JM3 812 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 WDR18Q9BV38 432 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 PICK1Q9NRD5 415 aa15.88■□□□□ 0.13
APEX1-205ENST00000553555 MMP1P03956 469 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
APEX1-205ENST00000553555 FOXD4L6Q3SYB3 417 aaPredicted RBP15.87■□□□□ 0.13
APEX1-205ENST00000553555 FOXD4L3Q6VB84 417 aaPredicted RBP15.87■□□□□ 0.13
APEX1-205ENST00000553555 ADGRF4Q8IZF3 695 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 PIGSQ96S52 555 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
APEX1-205ENST00000553555 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 AS3MTQ9HBK9 375 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 VPS54Q9P1Q0 977 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 KCNJ14Q9UNX9 436 aa15.87■□□□□ 0.13
APEX1-205ENST00000553555 SLC16A2P36021 539 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 BTNL9Q6UXG8 535 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.86■□□□□ 0.13
APEX1-205ENST00000553555 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 MTMR8Q96EF0 704 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 KIAA1683Q9H0B3 1180 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 SH3GLB2Q9NR46 395 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
APEX1-205ENST00000553555 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 TMEM232C9JQI7 657 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 IREB2P48200 963 aaKnown RBP15.86■□□□□ 0.13
APEX1-205ENST00000553555 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
APEX1-205ENST00000553555 MAP1SQ66K74 1059 aaPredicted RBP15.86■□□□□ 0.13
APEX1-205ENST00000553555 FAM173BQ6P4H8 233 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 FEZ1Q99689 392 aa15.86■□□□□ 0.13
APEX1-205ENST00000553555 PTPRFP10586 1907 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.136e-9■□□□□ 10.7
APEX1-205ENST00000553555 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
APEX1-205ENST00000553555 SPP2Q13103 211 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 SAFBQ15424 915 aaKnown RBP eCLIP15.85■□□□□ 0.13
APEX1-205ENST00000553555 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 BRAPQ7Z569 592 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 HOMER1Q86YM7 354 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 ZNF280CQ8ND82 737 aa15.85■□□□□ 0.13
APEX1-205ENST00000553555 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.139e-8■■■□□ 15.2
APEX1-205ENST00000553555 NMRK2Q9NPI5 230 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms