RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NLRP5P59047 1200 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 ZNF804AQ7Z570 1209 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 IQUBQ8NA54 791 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 RPGRQ92834 1020 aaKnown RBP14.68□□□□□ -0.06
SHMT2-205ENST00000553474 KAT14Q9H8E8 782 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 MCM9Q9NXL9 1143 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 PHLPP2Q6ZVD8 1323 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 KLRK1P26718 216 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 PDE6BP35913 854 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 SPATA1Q5VX52 437 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 RCSD1Q6JBY9 416 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 CCDC148Q8NFR7 591 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 SYMPKQ92797 1274 aaKnown RBP14.68□□□□□ -0.06
SHMT2-205ENST00000553474 LZTS2Q9BRK4 669 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
SHMT2-205ENST00000553474 SLU7O95391 586 aaKnown RBP14.67□□□□□ -0.06
SHMT2-205ENST00000553474 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 ATP2B1P20020 1258 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 CHRNA5P30532 468 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 LONP1P36776 959 aaKnown RBP14.67□□□□□ -0.06
SHMT2-205ENST00000553474 ETF1P62495 437 aaKnown RBP14.67□□□□□ -0.06
SHMT2-205ENST00000553474 DPYDQ12882 1025 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 PTGDRQ13258 359 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 C2CD5Q86YS7 1000 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 PDILTQ8N807 584 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 DAGLBQ8NCG7 672 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 TSC1Q92574 1164 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 DPF2Q92785 391 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 DHX58Q96C10 678 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
SHMT2-205ENST00000553474 SRRTQ9BXP5 876 aaKnown RBP14.67□□□□□ -0.06
SHMT2-205ENST00000553474 A0A1B0GTH6 734 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 SMIM22K7EJ46 135 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 LAD1O00515 517 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 MYL1P05976 194 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 TXLNAP40222 546 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
SHMT2-205ENST00000553474 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
SHMT2-205ENST00000553474 PLCG2P16885 1265 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 BRCA1P38398 1863 aaKnown RBP14.65□□□□□ -0.06
SHMT2-205ENST00000553474 USP5P45974 858 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHMT2-205ENST00000553474 GRM4Q14833 912 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 NR1I3Q14994 352 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 EARS2Q5JPH6 523 aaKnown RBP14.65□□□□□ -0.06
SHMT2-205ENST00000553474 USP49Q70CQ1 688 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 PNMA1Q8ND90 353 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 PCDHA4Q9UN74 947 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 SYNRGQ9UMZ2 1314 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 H0YIN7 160 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 SMARCA1P28370 1054 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 TFAP4Q01664 338 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 CUL4BQ13620 913 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 FAM47AQ5JRC9 791 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 SLF2Q8IX21 1173 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 BLIDQ8IZY5 108 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 ZNF622Q969S3 477 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHMT2-205ENST00000553474 PANX2Q96RD6 677 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 BAG1Q99933 345 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-205ENST00000553474 INTS13Q9NVM9 706 aa14.65□□□□□ -0.06
SHMT2-205ENST00000553474 CDK5RAP2Q96SN8 1893 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 VWA3AA6NCI4 1184 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 FAM205CA6NFA0 338 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 NMT2O60551 498 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 SPAG1Q07617 926 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF174Q15697 407 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 E2F4Q16254 413 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 FILIP1LQ4L180 1135 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 PPP4R3BQ5MIZ7 849 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 TMEM139Q8IV31 216 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 CCDC12Q8WUD4 166 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-205ENST00000553474 MKNK2Q9HBH9 465 aa14.64□□□□□ -0.07
SHMT2-205ENST00000553474 DDX60LQ5H9U9 1706 aaKnown RBP14.64□□□□□ -0.07
SHMT2-205ENST00000553474 SLX4Q8IY92 1834 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 A0A087X0B3 334 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 GTPBP6O43824 516 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 ATP2B4P23634 1241 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 CRY2Q49AN0 593 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 PIK3AP1Q6ZUJ8 805 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 TXNRD3Q86VQ6 643 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 HOMER1Q86YM7 354 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 ZNF444Q8N0Y2 327 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 GTPBP4Q9BZE4 634 aaKnown RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 FHDC1Q9C0D6 1143 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-205ENST00000553474 ITIH6Q6UXX5 1313 aa14.63□□□□□ -0.07
SHMT2-205ENST00000553474 hCG_1642624A0A1W2PR95 340 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 TMEM232C9JQI7 657 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 USP17L8P0C7I0 530 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 SRGNP10124 158 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 DPEP1P16444 411 aa14.62□□□□□ -0.07
SHMT2-205ENST00000553474 PRPHP41219 470 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms