RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MROH8Q9H579 483 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 MTMR4Q9NYA4 1195 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 SYNPO2Q9UMS6 1093 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 ADAMTS5Q9UNA0 930 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 F5H6K3 240 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 FOXP2O15409 715 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 TTLL1O95922 423 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 ERCC3P19447 782 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 KLRC3Q07444 240 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 CACNB2Q08289 660 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-207ENST00000553290 ALX1Q15699 326 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 CCL14Q16627 93 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 FAM83BQ5T0W9 1011 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-207ENST00000553290 ANKLE1Q8NAG6 615 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 NEDD1Q8NHV4 660 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 CEP95Q96GE4 821 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 PPP1R9AQ9ULJ8 1098 aa15.4■□□□□ 0.06
ACTN1-207ENST00000553290 ZNF236Q9UL36 1845 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 A0A0D9SFI3 127 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 SLC25A27O95847 323 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 TFAP4Q01664 338 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 TMEM132BQ14DG7 1078 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 MFSD14CQ5VZR4 134 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 DPP9Q86TI2 863 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 NCAPG2Q86XI2 1143 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 ABRAQ8N0Z2 381 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 FAM227BQ96M60 508 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 FBXO28Q9NVF7 368 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 ANAPC4Q9UJX5 808 aa15.39■□□□□ 0.05
ACTN1-207ENST00000553290 COL11A1P12107 1806 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-207ENST00000553290 VWA5AO00534 786 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 NDUFB10O96000 172 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 ADORA2AP29274 412 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
ACTN1-207ENST00000553290 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 NMIQ13287 307 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-207ENST00000553290 FAM47AQ5JRC9 791 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 RIOX2Q8IUF8 465 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 GMCL1P1Q8NEA9 526 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 DPF3Q92784 378 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 SLF1Q9BQI6 1058 aa15.38■□□□□ 0.05
ACTN1-207ENST00000553290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.38■□□□□ 0.05
ACTN1-207ENST00000553290 TSPY2A6NKD2 308 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 FGAP02671 866 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 COPB2P35606 906 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 STAT3P40763 770 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
ACTN1-207ENST00000553290 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 PAWRQ96IZ0 340 aaKnown RBP15.37■□□□□ 0.05
ACTN1-207ENST00000553290 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-207ENST00000553290 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 OGDHLQ9ULD0 1010 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 ZMYM6O95789 1325 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
ACTN1-207ENST00000553290 ORC4O43929 436 aa15.36■□□□□ 0.05
ACTN1-207ENST00000553290 HSPD1P10809 573 aaKnown RBP15.36■□□□□ 0.05
ACTN1-207ENST00000553290 FCER1AP12319 257 aa15.36■□□□□ 0.05
ACTN1-207ENST00000553290 SDSP20132 328 aa15.36■□□□□ 0.05
ACTN1-207ENST00000553290 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-207ENST00000553290 OLFML2BQ68BL8 750 aa15.36■□□□□ 0.05
ACTN1-207ENST00000553290 ZNF589Q86UQ0 364 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-207ENST00000553290 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
ACTN1-207ENST00000553290 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-207ENST00000553290 ZNFX1Q9P2E3 1918 aaKnown RBP15.35■□□□□ 0.05
ACTN1-207ENST00000553290 HIP1O00291 1037 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 RANBP6O60518 1105 aaKnown RBP15.35■□□□□ 0.05
ACTN1-207ENST00000553290 COBLO75128 1261 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 IGHA2P01877 340 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 FGRP09769 529 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 SLFN13Q68D06 897 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 LRRC47Q8N1G4 583 aaKnown RBP15.35■□□□□ 0.05
ACTN1-207ENST00000553290 NBPF3Q9H094 633 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-207ENST00000553290 NR2E3Q9Y5X4 410 aa15.35■□□□□ 0.05
ACTN1-207ENST00000553290 MSCO60682 206 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 ZBED4O75132 1171 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 FDX1P10109 184 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 BMP3P12645 472 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 CYP2C19P33261 490 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 LHX8Q68G74 356 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 DIS3LQ8TF46 1054 aaKnown RBP15.34■□□□□ 0.05
ACTN1-207ENST00000553290 MMP19Q99542 508 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 INCENPQ9NQS7 918 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
ACTN1-207ENST00000553290 H0YGN5 161 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 ATP2A1O14983 1001 aa15.33■□□□□ 0.04
ACTN1-207ENST00000553290 PCP11498 1178 aaKnown RBP15.33■□□□□ 0.04
ACTN1-207ENST00000553290 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms