RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 DPP9Q86TI2 863 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 RLFQ13129 1914 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 TRIM6-TRIM34B2RNG4 842 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 FOXP2O15409 715 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 SLC34A2O95436 690 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 NDUFB10O96000 172 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
CDK4-215ENST00000553237 HOXC6P09630 235 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 ADORA2AP29274 412 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 PDE4BQ07343 736 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 VPS53Q5VIR6 699 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 SHCBP1Q8NEM2 672 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 CEP95Q96GE4 821 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 FAM227BQ96M60 508 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 INCENPQ9NQS7 918 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 PPP1R9AQ9ULJ8 1098 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 CEP290O15078 2479 aa18.92■□□□□ 0.62
CDK4-215ENST00000553237 STRNO43815 780 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 CYP2C19P33261 490 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 TFAP4Q01664 338 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 CTDSPL2Q05D32 466 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 CHD1LQ86WJ1 897 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 ANKLE1Q8NAG6 615 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 RILPL2Q969X0 211 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 MROH8Q9H579 483 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 MTMR4Q9NYA4 1195 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 OGDHLQ9ULD0 1010 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 ADAMTS5Q9UNA0 930 aa18.91■□□□□ 0.62
CDK4-215ENST00000553237 VWA5AO00534 786 aa18.9■□□□□ 0.62
CDK4-215ENST00000553237 COBLO75128 1261 aa18.9■□□□□ 0.62
CDK4-215ENST00000553237 MNX1P50219 401 aaPredicted RBP18.9■□□□□ 0.62
CDK4-215ENST00000553237 HABP4Q5JVS0 413 aaKnown RBP18.9■□□□□ 0.62
CDK4-215ENST00000553237 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
CDK4-215ENST00000553237 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
CDK4-215ENST00000553237 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
CDK4-215ENST00000553237 COLQQ9Y215 455 aaPredicted RBP18.9■□□□□ 0.62
CDK4-215ENST00000553237 A0A0D9SFI3 127 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 EVI5O60447 810 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 TTLL1O95922 423 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 CNGA1P29973 690 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 STAT3P40763 770 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 NUCB1Q02818 461 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 LHX8Q68G74 356 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 MKL1Q969V6 931 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 SLF1Q9BQI6 1058 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 NBPF3Q9H094 633 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 NR2E3Q9Y5X4 410 aa18.89■□□□□ 0.61
CDK4-215ENST00000553237 GREB1LQ9C091 1923 aaPredicted RBP18.89■□□□□ 0.61
CDK4-215ENST00000553237 SLC25A27O95847 323 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
CDK4-215ENST00000553237 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 PLEKHM2Q8IWE5 1019 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 REPS2Q8NFH8 660 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 A0A0G2JMZ2 1700 aa18.88■□□□□ 0.61
CDK4-215ENST00000553237 FCER1AP12319 257 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 RIOX2Q8IUF8 465 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 TRPV1Q8NER1 839 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 MMP19Q99542 508 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 C11orf49Q9H6J7 331 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 ZNF214Q9UL59 606 aaPredicted RBP18.87■□□□□ 0.61
CDK4-215ENST00000553237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
CDK4-215ENST00000553237 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
CDK4-215ENST00000553237 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 FGAP02671 866 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
CDK4-215ENST00000553237 ALX1Q15699 326 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 CHRDL2Q6WN34 429 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 ZNF589Q86UQ0 364 aaPredicted RBP18.86■□□□□ 0.61
CDK4-215ENST00000553237 ABRAQ8N0Z2 381 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 PRPF38AQ8NAV1 312 aaKnown RBP18.86■□□□□ 0.61
CDK4-215ENST00000553237 KIFC2Q96AC6 838 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 SLC5A4Q9NY91 659 aa18.86■□□□□ 0.61
CDK4-215ENST00000553237 ISY1Q9ULR0 285 aaKnown RBP18.86■□□□□ 0.61
CDK4-215ENST00000553237 PLIN4Q96Q06 1357 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
CDK4-215ENST00000553237 IGHA2P01877 340 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 PGK2P07205 417 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 PRAMEF19Q5SWL8 479 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 CPXCR1Q8N123 301 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 GMCL1P1Q8NEA9 526 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 DDX20Q9UHI6 824 aaKnown RBP18.85■□□□□ 0.61
CDK4-215ENST00000553237 ANAPC4Q9UJX5 808 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 CTDP1Q9Y5B0 961 aaPredicted RBP18.85■□□□□ 0.61
CDK4-215ENST00000553237 PARP14Q460N5 1801 aa18.85■□□□□ 0.61
CDK4-215ENST00000553237 NMT2O60551 498 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 ZBED4O75132 1171 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 HSPD1P10809 573 aaKnown RBP18.84■□□□□ 0.61
CDK4-215ENST00000553237 CYBAP13498 195 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 SDSP20132 328 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 KCTD2Q14681 263 aa18.84■□□□□ 0.61
CDK4-215ENST00000553237 SNRNP48Q6IEG0 339 aaKnown RBP18.84■□□□□ 0.61
CDK4-215ENST00000553237 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms