RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
HCFC2-206ENST00000552343 SP110Q9HB58 689 aa6.33□□□□□ -1.4
HCFC2-206ENST00000552343 R3HCC1Q9Y3T6 440 aaKnown RBP6.33□□□□□ -1.4
HCFC2-206ENST00000552343 WASH4PA8MWX3 477 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 GREM1O60565 184 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 EIF5BO60841 1220 aaKnown RBP6.32□□□□□ -1.4
HCFC2-206ENST00000552343 SYN1P17600 705 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 GTF2F1P35269 517 aaKnown RBP eCLIP6.32□□□□□ -1.4
HCFC2-206ENST00000552343 ZNF746Q6NUN9 644 aaPredicted RBP6.32□□□□□ -1.4
HCFC2-206ENST00000552343 HDXQ7Z353 690 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
HCFC2-206ENST00000552343 JARID2Q92833 1246 aaPredicted RBP6.32□□□□□ -1.4
HCFC2-206ENST00000552343 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
HCFC2-206ENST00000552343 KIR3DL1P43629 444 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 RPL6Q02878 288 aaKnown RBP6.31□□□□□ -1.4
HCFC2-206ENST00000552343 PDE4BQ07343 736 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 IRF2BP1Q8IU81 584 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 SLITRK4Q8IW52 837 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
HCFC2-206ENST00000552343 FERD3LQ96RJ6 166 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 C19orf44Q9H6X5 657 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 CNOT6Q9ULM6 557 aaKnown RBP6.31□□□□□ -1.4
HCFC2-206ENST00000552343 EFR3BQ9Y2G0 817 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 SNCAIPQ9Y6H5 919 aa6.31□□□□□ -1.4
HCFC2-206ENST00000552343 ABCC9O60706 1549 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 F6X3S4 739 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 TRIM13O60858 407 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 IGSF3O75054 1194 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 CILPO75339 1184 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 F13A1P00488 732 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 MCM4P33991 863 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 SOX9P48436 509 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
HCFC2-206ENST00000552343 PTPN11Q06124 597 aaPredicted RBP6.3□□□□□ -1.4
HCFC2-206ENST00000552343 SEPT6Q14141 434 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 SEZ6Q53EL9 994 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 TNNI3KQ59H18 835 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 REC114Q7Z4M0 266 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 ZNF605Q86T29 641 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 OR6P1Q8NGX9 317 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
HCFC2-206ENST00000552343 UBP1Q9NZI7 540 aa6.3□□□□□ -1.4
HCFC2-206ENST00000552343 U2SURPO15042 1029 aaKnown RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 PEX10O60683 326 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 SEMA7AO75326 666 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 CST3P01034 146 aaPredicted RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 FGRP09769 529 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 CYP7A1P22680 504 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 LRRFIP1Q32MZ4 808 aaKnown RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 NBPF6Q5VWK0 638 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 PRAMEF13Q5VWM6 474 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 HID1Q8IV36 788 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 PIWIL2Q8TC59 973 aaKnown RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 COX4I2Q96KJ9 171 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 NBPF4Q96M43 638 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 SRRTQ9BXP5 876 aaKnown RBP6.29□□□□□ -1.4
HCFC2-206ENST00000552343 SLC6A17Q9H1V8 727 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 GCM1Q9NP62 436 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 KCTD3Q9Y597 815 aa6.29□□□□□ -1.4
HCFC2-206ENST00000552343 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 TEX51A0A1B0GUA7 166 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 GARTP22102 1010 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 SKOR2Q2VWA4 1001 aaPredicted RBP6.28□□□□□ -1.4
HCFC2-206ENST00000552343 TIGD5Q53EQ6 642 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 BNC2Q6ZN30 1099 aaPredicted RBP6.28□□□□□ -1.4
HCFC2-206ENST00000552343 GGNQ86UU5 652 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 SGPP1Q9BX95 441 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 PCDHB5Q9Y5E4 795 aa6.28□□□□□ -1.4
HCFC2-206ENST00000552343 FAM221AA4D161 298 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 ZGLP1P0C6A0 271 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 FBXW10Q5XX13 1052 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 TMEM132EQ6IEE7 984 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 PRRT2Q7Z6L0 340 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 GAL3ST3Q96A11 431 aa6.27□□□□□ -1.41
HCFC2-206ENST00000552343 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 ZNF552Q9H707 407 aaPredicted RBP6.27□□□□□ -1.41
HCFC2-206ENST00000552343 CDK8P49336 464 aa6.26□□□□□ -1.41
HCFC2-206ENST00000552343 GAB4Q2WGN9 574 aa6.26□□□□□ -1.41
HCFC2-206ENST00000552343 INTS4Q96HW7 963 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms