RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SOCS7O14512 581 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 RGL2O15211 777 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SHMT1P34896 483 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SCG2P13521 617 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 IDEP14735 1019 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 ERCC3P19447 782 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 ALX1Q15699 326 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 CERS3Q8IU89 383 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 C2orf69Q8N8R5 385 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 C16orf86Q6ZW13 317 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 PSTPIP2Q9H939 334 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 HIRAP54198 1017 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 TPD52L1Q16890 204 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 SYAP1Q96A49 352 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 BECN2A8MW95 431 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 STAT2P52630 851 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 FBXO11Q86XK2 927 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 APOBEC3FQ8IUX4 373 aaKnown RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 TNMDQ9H2S6 317 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 RBM28Q9NW13 759 aaKnown RBP9.35□□□□□ -0.91
CHPT1-208ENST00000552215 SUGT1Q9Y2Z0 365 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
CHPT1-208ENST00000552215 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
CHPT1-208ENST00000552215 DHX58Q96C10 678 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 SH2D4AQ9H788 454 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 YY1P25490 414 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 CCDC178Q5BJE1 867 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 DACT1Q9NYF0 836 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
CHPT1-208ENST00000552215 SHANK3Q9BYB0 1731 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 ZBED4O75132 1171 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 PRR16Q569H4 304 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 SASS6Q6UVJ0 657 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 GINS2Q9Y248 185 aa9.34□□□□□ -0.91
CHPT1-208ENST00000552215 UBA7P41226 1012 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 ADCY7P51828 1080 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 REXO1Q8N1G1 1221 aaKnown RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 EEF2KMTQ96G04 330 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 TJP1Q07157 1748 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 SPTLC2O15270 562 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 CTDNEP1O95476 244 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 LIFRP42702 1097 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 JAG1P78504 1218 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 DGKHQ86XP1 1220 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 FBXO18Q8NFZ0 1043 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 CHURC1Q8WUH1 139 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 GOLGA6L3A6NEY3 463 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 ENTPD3O75355 529 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 RPS12P25398 132 aaKnown RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 MRPL12P52815 198 aaKnown RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 QRICH1Q2TAL8 776 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 SYDE2Q5VT97 1194 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 CCDC12Q8WUD4 166 aaPredicted RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
CHPT1-208ENST00000552215 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 AS3MTQ9HBK9 375 aa9.33□□□□□ -0.92
CHPT1-208ENST00000552215 A0A1W2PRG0 241 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CAP2P40123 477 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CYP4A11Q02928 519 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CCDC148Q8NFR7 591 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CDCA5Q96FF9 252 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 COBLO75128 1261 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CNGA1P29973 690 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 GNA11P29992 359 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 SBK1Q52WX2 424 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 JMYQ8N9B5 988 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TBC1D5Q92609 795 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 IVNS1ABPQ9Y6Y0 642 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 ORC4O43929 436 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 CYP2C8P10632 490 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms