RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 MAGEF1Q9HAY2 307 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 EPB41L4AQ9HCS5 686 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZSWIM5Q9P217 1185 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF652Q9Y2D9 606 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 NFE2L3Q9Y4A8 694 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ARIH1Q9Y4X5 557 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 PARP3Q9Y6F1 533 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MYH14Q7Z406 1995 aaKnown RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MYH7BA7E2Y1 1941 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 SBF2Q86WG5 1849 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 SPDYE16A6NNV3 312 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ACTN4O43707 911 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 KIF5CO60282 957 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 DTNBO60941 627 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ERLIN1O75477 346 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 EIF3JO75822 258 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 URI1O94763 535 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 CALML3P27482 149 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TXLNAP40222 546 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PHKA1P46020 1223 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PPARAQ07869 468 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ORC2Q13416 577 aaPredicted RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 NR1I3Q14994 352 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TSR1Q2NL82 804 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ARHGAP29Q52LW3 1261 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TJAP1Q5JTD0 557 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 GALNT17Q6IS24 598 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 SH3RF1Q7Z6J0 888 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 CATIPQ7Z7H3 387 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PPFIBP1Q86W92 1011 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 DZIP3Q86Y13 1208 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 CERS3Q8IU89 383 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TMTC1Q8IUR5 882 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 STK11IPQ8N1F8 1099 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TXLNBQ8N3L3 684 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 MAGEB6Q8N7X4 407 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 TC2NQ8N9U0 490 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 NOC3LQ8WTT2 800 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PIGBQ92521 554 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PHKBQ93100 1093 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 RPGRIP1Q96KN7 1286 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PHF20Q9BVI0 1012 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 UTP14AQ9BVJ6 771 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ACBD3Q9H3P7 528 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 ARFGAP3Q9NP61 516 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 SH3GLB2Q9NR46 395 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 STRN4Q9NRL3 753 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 PSD3Q9NYI0 1048 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 FAM198AQ9UFP1 575 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 WWC3Q9ULE0 1092 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 DENND2AQ9ULE3 1009 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 THRAP3Q9Y2W1 955 aaKnown RBP6.1□□□□□ -1.43
CCNT1-204ENST00000551989 SLC4A4Q9Y6R1 1079 aa6.1□□□□□ -1.43
CCNT1-204ENST00000551989 SLIT2O94813 1529 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 TNKSO95271 1327 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 DDX60LQ5H9U9 1706 aaKnown RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 LRRC10BA6NIK2 292 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 BTBD18B2RXH4 712 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 LAD1O00515 517 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 LCE2BO14633 110 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 POLR2DO15514 142 aaKnown RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ORC4O43929 436 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PNMA6AP0CW24 399 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ATP1A3P13637 1013 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 KIF5BP33176 963 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PBX1P40424 430 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 TOB1P50616 345 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 EIF5P55010 431 aaKnown RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PIP4K2BP78356 416 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ATP2C1P98194 919 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PPP2R3AQ06190 1150 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 RASGRF1Q13972 1273 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 SEC23AQ15436 765 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 WHAMMP3Q1A5X7 153 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 CDKAL1Q5VV42 579 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 CLEC4GQ6UXB4 293 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF662Q6ZS27 426 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 RASGRP2Q7LDG7 609 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PACS2Q86VP3 889 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 IQUBQ8NA54 791 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 EHBP1Q8NDI1 1231 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 RUBCNQ92622 972 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ERCC4Q92889 916 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 CUEDC2Q9H467 287 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 PRDM10Q9NQV6 1147 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 BCCIPQ9P287 314 aaKnown RBP eCLIP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 ARPP21Q9UBL0 812 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 LIMA1Q9UHB6 759 aaKnown RBP6.09□□□□□ -1.43
CCNT1-204ENST00000551989 SERTAD1Q9UHV2 236 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 RWDD2AQ9UIY3 292 aa6.09□□□□□ -1.43
CCNT1-204ENST00000551989 MAGEB6P1A0A0J9YX57 407 aa6.08□□□□□ -1.44
CCNT1-204ENST00000551989 A0A1W2PQC6 194 aa6.08□□□□□ -1.44
CCNT1-204ENST00000551989 C3orf80F5H4A9 247 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms