RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 DSG3P32926 999 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 PSMC4P43686 418 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 NOVP48745 357 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-225ENST00000551845 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 FAM110CQ1W6H9 321 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
PTCH1-225ENST00000551845 CCAR1Q8IX12 1150 aaKnown RBP12.5□□□□□ -0.41
PTCH1-225ENST00000551845 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
PTCH1-225ENST00000551845 RBPJLQ9UBG7 517 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 RABGAP1Q9Y3P9 1069 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 ADGRA2Q96PE1 1338 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 MKI67P46013 3256 aaKnown RBP12.49□□□□□ -0.41
PTCH1-225ENST00000551845 CDK5RAP2Q96SN8 1893 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 NEDD4P46934 1319 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 NDUFB10O96000 172 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 BMP3P12645 472 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 MCCP23508 829 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 SLC1A4P43007 532 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 FCGRTP55899 365 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 Q3C1V9 767 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 LRRC47Q8N1G4 583 aaKnown RBP12.49□□□□□ -0.41
PTCH1-225ENST00000551845 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-225ENST00000551845 TMEM47Q9BQJ4 181 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 UBAC1Q9BSL1 405 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 OTOFQ9HC10 1997 aa12.49□□□□□ -0.41
PTCH1-225ENST00000551845 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 ERICH2A1L162 156 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 SLC27A2O14975 620 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
PTCH1-225ENST00000551845 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-225ENST00000551845 ZKSCAN1P17029 563 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-225ENST00000551845 CCNA1P78396 465 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 RCSD1Q6JBY9 416 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 MB21D1Q8N884 522 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
PTCH1-225ENST00000551845 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
PTCH1-225ENST00000551845 DOCK1Q14185 1865 aa12.48□□□□□ -0.41
PTCH1-225ENST00000551845 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 MYPNQ86TC9 1320 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 TNPO2O14787 897 aaKnown RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 PRMT2P55345 433 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 ERVK-9P63128 1117 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 ERVK-24P63145 666 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 COA7Q96BR5 231 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 ARHGAP39Q9C0H5 1083 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
PTCH1-225ENST00000551845 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
PTCH1-225ENST00000551845 HTTP42858 3142 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 IFIT3O14879 490 aaKnown RBP12.46□□□□□ -0.41
PTCH1-225ENST00000551845 EPB41L2O43491 1005 aaKnown RBP12.46□□□□□ -0.41
PTCH1-225ENST00000551845 ZBED4O75132 1171 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 MAPK4P31152 587 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 IKQ13123 557 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-225ENST00000551845 KRT32Q14532 448 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 TSGA10IPQ3SY00 556 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.41
PTCH1-225ENST00000551845 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 ATG4CQ96DT6 458 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
PTCH1-225ENST00000551845 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 ADAMTS5Q9UNA0 930 aa12.46□□□□□ -0.41
PTCH1-225ENST00000551845 TNKSO95271 1327 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 VWA5AO00534 786 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 PEX10O60683 326 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 PLA2G6O60733 806 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 FDX1P10109 184 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 MCM5P33992 734 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 PLS1Q14651 629 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 STOX1Q6ZVD7 989 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms