RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SLC9A7Q96T83 725 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 KIF2CQ99661 725 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCAF11-215ENST00000551391 ZNF408Q9H9D4 720 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-215ENST00000551391 MAPK8IP1Q9UQF2 711 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 FAM155AB1AL88 458 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-215ENST00000551391 UBOX5O94941 541 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 ACRP10323 421 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 CFPP27918 469 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 GBP1P32455 592 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 ETFBP38117 255 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 NKPD1Q17RQ9 610 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 RUFY4Q6ZNE9 571 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 CDH24Q86UP0 819 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 LRRC56Q8IYG6 542 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-215ENST00000551391 FAM169BQ8N8A8 192 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 XAGE3Q8WTP9 111 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 VWCEQ96DN2 955 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 DHRS1Q96LJ7 313 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 MRVI1Q9Y6F6 885 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 PITPNM2Q9BZ72 1349 aa5.48□□□□□ -1.53
SCAF11-215ENST00000551391 NFIBO00712 420 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 STK10O94804 968 aaKnown RBP5.47□□□□□ -1.53
SCAF11-215ENST00000551391 KIR3DL1P43629 444 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 NBPF6Q5VWK0 638 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 FYB2Q5VWT5 728 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 UNC5AQ6ZN44 842 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 PRR23BQ6ZRT6 265 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 TTC6Q86TZ1 520 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 SIAH1Q8IUQ4 282 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 RNF141Q8WVD5 230 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 CCDC120Q96HB5 630 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 NBPF4Q96M43 638 aa5.47□□□□□ -1.53
SCAF11-215ENST00000551391 HIRIP3Q9BW71 556 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-215ENST00000551391 CARS2Q9HA77 564 aaKnown RBP5.47□□□□□ -1.53
SCAF11-215ENST00000551391 A0A1W2PQH9 124 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 SMAD7O15105 426 aaKnown RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 ZNF865P0CJ78 1059 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 POLR2BP30876 1174 aaKnown RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 SFRP5Q5T4F7 317 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 SOGA3Q5TF21 947 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 UBXN4Q92575 508 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 KREMEN1Q96MU8 473 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 ASPNQ9BXN1 380 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 PHAXQ9H814 394 aaKnown RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 SUCOQ9UBS9 1254 aaKnown RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 TPX2Q9ULW0 747 aaKnown RBP5.46□□□□□ -1.54
SCAF11-215ENST00000551391 CNTNAP4Q9C0A0 1308 aa5.46□□□□□ -1.54
SCAF11-215ENST00000551391 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 KLF4O43474 513 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 CLEC3AO75596 197 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 TMEM253P0C7T8 217 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 GTF2F1P35269 517 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 RNF4P78317 190 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 ZYXQ15942 572 aaKnown RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 BBS9Q3SYG4 887 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 NBPF12Q5TAG4 269 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 LILRA6Q6PI73 481 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 FBXO15Q8NCQ5 510 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 HSPA12BQ96MM6 686 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 ZNF214Q9UL59 606 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-215ENST00000551391 LTBP3Q9NS15 1303 aa5.45□□□□□ -1.54
SCAF11-215ENST00000551391 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 GDNFP39905 211 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 ANKS3Q6ZW76 656 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 PIWIL2Q8TC59 973 aaKnown RBP5.44□□□□□ -1.54
SCAF11-215ENST00000551391 DHX38Q92620 1227 aaKnown RBP5.44□□□□□ -1.54
SCAF11-215ENST00000551391 SLC6A18Q96N87 628 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 DIRC2Q96SL1 478 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 NSUN3Q9H649 340 aaKnown RBP5.44□□□□□ -1.54
SCAF11-215ENST00000551391 ATP13A1Q9HD20 1204 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
SCAF11-215ENST00000551391 RAC2P15153 192 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 RAB33AQ14088 237 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 LCNL1Q6ZST4 164 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 CILP2Q8IUL8 1156 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 MFSD4AQ8N468 514 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 KCNH3Q9ULD8 1083 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 R3HCC1Q9Y3T6 440 aaKnown RBP5.43□□□□□ -1.54
SCAF11-215ENST00000551391 CAPN6Q9Y6Q1 641 aa5.43□□□□□ -1.54
SCAF11-215ENST00000551391 NCAPHQ15003 741 aa5.42□□□□□ -1.54
SCAF11-215ENST00000551391 FXNQ16595 210 aa5.42□□□□□ -1.54
SCAF11-215ENST00000551391 NBPF9Q3BBW0 867 aa5.42□□□□□ -1.54
SCAF11-215ENST00000551391 C1QL4Q86Z23 238 aa5.42□□□□□ -1.54
SCAF11-215ENST00000551391 Q96M66 194 aa5.42□□□□□ -1.54
SCAF11-215ENST00000551391 DCP1AQ9NPI6 582 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-215ENST00000551391 PRR33A8MZF0 331 aa5.41□□□□□ -1.54
SCAF11-215ENST00000551391 H3BS24 57 aa5.41□□□□□ -1.54
SCAF11-215ENST00000551391 SRFP11831 508 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms