RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FLOT1O75955 427 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 FARP2O94887 1054 aaPredicted RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 NDUFB10O96000 172 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 APPP05067 770 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 HOXC6P09630 235 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 RGS2P41220 211 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 PPARAQ07869 468 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 CACNB2Q08289 660 aaPredicted RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 TMEM132BQ14DG7 1078 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 DIS3LQ8TF46 1054 aaKnown RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 SH2D4AQ9H788 454 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 HOXC10Q9NYD6 342 aa15.55■□□□□ 0.08
NPAS3-209ENST00000551008 RANBP2P49792 3224 aaKnown RBP15.55■□□□□ 0.08
NPAS3-209ENST00000551008 CCND3P30281 292 aaPredicted RBP15.54■□□□□ 0.08
NPAS3-209ENST00000551008 CCNA1P78396 465 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
NPAS3-209ENST00000551008 SHCBP1Q8NEM2 672 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 NAPBQ9H115 298 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 MTMR4Q9NYA4 1195 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
NPAS3-209ENST00000551008 PPP1R9AQ9ULJ8 1098 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 MCM3APO60318 1980 aa15.54■□□□□ 0.08
NPAS3-209ENST00000551008 COBLO75128 1261 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 ZKSCAN1P17029 563 aaPredicted RBP15.53■□□□□ 0.08
NPAS3-209ENST00000551008 ERCC3P19447 782 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 PDE4AP27815 886 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
NPAS3-209ENST00000551008 CTDSPL2Q05D32 466 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 MKL1Q969V6 931 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 NBPF3Q9H094 633 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 HMX1Q9NP08 348 aaPredicted RBP15.53■□□□□ 0.08
NPAS3-209ENST00000551008 HELLSQ9NRZ9 838 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 LCTP09848 1927 aa15.53■□□□□ 0.08
NPAS3-209ENST00000551008 F5H6K3 240 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 VWA5AO00534 786 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 ADORA2AP29274 412 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 KLRC3Q07444 240 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 ALX1Q15699 326 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 WDR78Q5VTH9 848 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 LHX8Q68G74 356 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 LRRC47Q8N1G4 583 aaKnown RBP15.52■□□□□ 0.08
NPAS3-209ENST00000551008 TRPV1Q8NER1 839 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 NACAP1Q9BZK3 213 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
NPAS3-209ENST00000551008 OGDHLQ9ULD0 1010 aa15.52■□□□□ 0.08
NPAS3-209ENST00000551008 H0YGN5 161 aa15.51■□□□□ 0.07
NPAS3-209ENST00000551008 TFRCP02786 760 aaKnown RBP15.51■□□□□ 0.07
NPAS3-209ENST00000551008 FGRP09769 529 aa15.51■□□□□ 0.07
NPAS3-209ENST00000551008 TFAP4Q01664 338 aa15.51■□□□□ 0.07
NPAS3-209ENST00000551008 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
NPAS3-209ENST00000551008 TRMT44Q8IYL2 757 aaKnown RBP15.51■□□□□ 0.07
NPAS3-209ENST00000551008 ZNF444Q8N0Y2 327 aaPredicted RBP15.51■□□□□ 0.07
NPAS3-209ENST00000551008 PAWRQ96IZ0 340 aaKnown RBP15.51■□□□□ 0.07
NPAS3-209ENST00000551008 IL17RBQ9NRM6 502 aa15.51■□□□□ 0.07
NPAS3-209ENST00000551008 ZMYM6O95789 1325 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 NMT2O60551 498 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 SLC34A2O95436 690 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 FGAP02671 866 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 HSPD1P10809 573 aaKnown RBP15.5■□□□□ 0.07
NPAS3-209ENST00000551008 SDSP20132 328 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 CYP2C19P33261 490 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 NOVP48745 357 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 MCMDC2Q4G0Z9 681 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 RIOX2Q8IUF8 465 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 IL25Q9H293 177 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 DNAH12Q6ZR08 3092 aa15.5■□□□□ 0.07
NPAS3-209ENST00000551008 PFASO15067 1338 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 CCDC171Q6TFL3 1326 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 ORC4O43929 436 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 RAD21O60216 631 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 TTLL1O95922 423 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 CYBAP13498 195 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 PDE4BQ07343 736 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 PLS1Q14651 629 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 RILPL2Q969X0 211 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 MROH8Q9H579 483 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 SYNPO2Q9UMS6 1093 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 RIPK3Q9Y572 518 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
NPAS3-209ENST00000551008 STRNO43815 780 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 TSPY3P0CV98 308 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 TSPY8P0CW00 308 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms