RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 UNC13BO14795 1591 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 SHISA8B8ZZ34 492 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 RGS13O14921 159 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 DEAF1O75398 565 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-206ENST00000550987 RING1Q06587 406 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 TKFCQ3LXA3 575 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
CPSF6-206ENST00000550987 DYMQ7RTS9 669 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 SLFN12Q8IYM2 578 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 ZBTB38Q8NAP3 1195 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-206ENST00000550987 SLC6A18Q96N87 628 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 DISC1Q9NRI5 854 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
CPSF6-206ENST00000550987 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 CLEC3AO75596 197 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 NID1P14543 1247 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 MASP1P48740 699 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 LONRF2Q1L5Z9 754 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 SLC10A6Q3KNW5 377 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 HEATR6Q6AI08 1181 aaKnown RBP7.34□□□□□ -1.23
CPSF6-206ENST00000550987 ACAD11Q709F0 780 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 ADAT2Q7Z6V5 191 aaKnown RBP7.34□□□□□ -1.23
CPSF6-206ENST00000550987 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 NEDD1Q8NHV4 660 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 KLHL6Q8WZ60 621 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 DPH2Q9BQC3 489 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-206ENST00000550987 RNF208Q9H0X6 261 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 CD2APQ9Y5K6 639 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 ATP10AO60312 1499 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 CARMIL2Q6F5E8 1435 aa7.34□□□□□ -1.23
CPSF6-206ENST00000550987 ERBB4Q15303 1308 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 LRRC9Q6ZRR7 1453 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 CCDC163A0A0D9SF12 145 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 HCLS1P14317 486 aaPredicted RBP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 CNGA1P29973 690 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 ASPAP45381 313 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 PMS1P54277 932 aaKnown RBP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 TTLL4Q14679 1199 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 TMEM67Q5HYA8 995 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 SGSM3Q96HU1 749 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 METTL14Q9HCE5 456 aaKnown RBP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 SUCOQ9UBS9 1254 aaKnown RBP7.33□□□□□ -1.24
CPSF6-206ENST00000550987 PLAAQ9Y263 795 aa7.33□□□□□ -1.24
CPSF6-206ENST00000550987 WDR90Q96KV7 1748 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 DNMT1P26358 1616 aaKnown RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 MEGF11A6BM72 1044 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 SPDYE3A6NKU9 549 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 TM4SF5O14894 197 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 DRD2P14416 443 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 ZNF143P52747 638 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 KRT76Q01546 638 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 TRIM28Q13263 835 aaKnown RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 HSP90AA2PQ14568 343 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 TDRD10Q5VZ19 366 aaKnown RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 ZNF787Q6DD87 383 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 FDX2Q6P4F2 183 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 TMEM192Q8IY95 271 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 BAHD1Q8TBE0 780 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-206ENST00000550987 XAGE3Q8WTP9 111 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 TMPRSS13Q9BYE2 586 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 FBRSQ9HAH7 460 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 ENAMQ9NRM1 1142 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 MROH2AA6NES4 1674 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 IQGAP1P46940 1657 aa7.32□□□□□ -1.24
CPSF6-206ENST00000550987 A0A0A0MRY4 1105 aa7.31□□□□□ -1.24
CPSF6-206ENST00000550987 MARCH6O60337 910 aa7.31□□□□□ -1.24
CPSF6-206ENST00000550987 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 L1CAMP32004 1257 aa7.31□□□□□ -1.24
CPSF6-206ENST00000550987 NKG7Q16617 165 aa7.31□□□□□ -1.24
CPSF6-206ENST00000550987 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 FMR1NBQ8N0W7 255 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 SMG8Q8ND04 991 aaKnown RBP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 SMARCC1Q92922 1105 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 SUGT1Q9Y2Z0 365 aa7.31□□□□□ -1.24
CPSF6-206ENST00000550987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.31□□□□□ -1.24
CPSF6-206ENST00000550987 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 LCE2BO14633 110 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 EPHX1P07099 455 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 ADH5P11766 374 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 COL9A3Q14050 684 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-206ENST00000550987 DALRD3Q5D0E6 543 aaKnown RBP7.3□□□□□ -1.24
CPSF6-206ENST00000550987 PRAMEF13Q5VWM6 474 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 LYPD4Q6UWN0 246 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 CYB5D2Q8WUJ1 264 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 HAUS7Q99871 368 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 FOXQ1Q9C009 403 aa7.3□□□□□ -1.24
CPSF6-206ENST00000550987 MKRN2Q9H000 416 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms