RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
SCAF11-213ENST00000550629 DRD2P14416 443 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 SPINK2P20155 84 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-213ENST00000550629 FAAP100Q0VG06 881 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-213ENST00000550629 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 DTHD1Q6ZMT9 781 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 DDX54Q8TDD1 881 aaKnown RBP7.58□□□□□ -1.2
SCAF11-213ENST00000550629 LTV1Q96GA3 475 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-213ENST00000550629 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
SCAF11-213ENST00000550629 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
SCAF11-213ENST00000550629 U2AF1L5P0DN76 240 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-213ENST00000550629 TAL1P17542 331 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-213ENST00000550629 U2AF1Q01081 240 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCAF11-213ENST00000550629 CCDC184Q52MB2 194 aa7.57□□□□□ -1.2
SCAF11-213ENST00000550629 NXPE4Q6UWF7 544 aa7.57□□□□□ -1.2
SCAF11-213ENST00000550629 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
SCAF11-213ENST00000550629 TCP11L2Q8N4U5 519 aa7.57□□□□□ -1.2
SCAF11-213ENST00000550629 PPP4R2Q9NY27 417 aa7.57□□□□□ -1.2
SCAF11-213ENST00000550629 RGPD5Q99666 1765 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 DISP2A7MBM2 1401 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 SULT6B1Q6IMI4 303 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 RAPGEF4Q8WZA2 1011 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 FMNL2Q96PY5 1086 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 CORO1BQ9BR76 489 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 WWC3Q9ULE0 1092 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
SCAF11-213ENST00000550629 OVOS2A0A0G2JMS6 1433 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 NEFMP07197 916 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 IL2RBP14784 551 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 RBM6P78332 1123 aaKnown RBP7.55□□□□□ -1.2
SCAF11-213ENST00000550629 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
SCAF11-213ENST00000550629 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
SCAF11-213ENST00000550629 MAP4P27816 1152 aaKnown RBP7.54□□□□□ -1.2
SCAF11-213ENST00000550629 PRKAR2BP31323 418 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 NGEFQ8N5V2 710 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 C2CD4AQ8NCU7 369 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-213ENST00000550629 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 RUNDC1Q96C34 613 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
SCAF11-213ENST00000550629 PARP4Q9UKK3 1724 aaKnown RBP7.54□□□□□ -1.2
SCAF11-213ENST00000550629 GLI3P10071 1580 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 THSD7AQ9UPZ6 1657 aa7.54□□□□□ -1.2
SCAF11-213ENST00000550629 MEGF6O75095 1541 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 ADAMTS4O75173 837 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 WNT11O96014 354 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 HMOX1P09601 288 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 ADH5P11766 374 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 RXRBP28702 533 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 PLEKHO1Q53GL0 409 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 AKAP4Q5JQC9 854 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 SND1Q7KZF4 910 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 USHBP1Q8N6Y0 703 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 RGS17Q9UGC6 210 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 GPN3Q9UHW5 284 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-213ENST00000550629 SPG7Q9UQ90 795 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
SCAF11-213ENST00000550629 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 MAPK8IP3Q9UPT6 1336 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 TNS2Q63HR2 1409 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 PKD1L3Q7Z443 1732 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 WNK3Q9BYP7 1800 aa7.52□□□□□ -1.2
SCAF11-213ENST00000550629 RGPD2P0DJD1 1756 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 HTATSF1O43719 755 aaKnown RBP7.52□□□□□ -1.21
SCAF11-213ENST00000550629 USP11P51784 963 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 FAM9BQ8IZU0 186 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 C3orf58Q8NDZ4 430 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 ZCRB1Q8TBF4 217 aaKnown RBP7.52□□□□□ -1.21
SCAF11-213ENST00000550629 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 KRTAP4-11Q9BYQ6 195 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
SCAF11-213ENST00000550629 TMEM39AQ9NV64 488 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 USP35Q9P2H5 1018 aa7.52□□□□□ -1.21
SCAF11-213ENST00000550629 WDR64B1ANS9 1081 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 EXOC5O00471 708 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 AOC2O75106 756 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms