RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 NR1H3Q13133 447 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 TNFAIP1Q13829 316 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 TICAM2Q86XR7 235 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 TRIM22Q8IYM9 498 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 NEUROD6Q96NK8 337 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 DEFB129Q9H1M3 183 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 DBNLQ9UJU6 430 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 SCAF8Q9UPN6 1271 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 SCN9AQ15858 1988 aa7.45□□□□□ -1.22
DEPDC4-209ENST00000550587 COL1A1P02452 1464 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 PSME4Q14997 1843 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 CDC45O75419 566 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 FGFR2P21802 821 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 GPC1P35052 558 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 TNNI2P48788 182 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 PUM3Q15397 648 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 ATP2B3Q16720 1220 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 GORABQ5T7V8 394 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 RNF20Q5VTR2 975 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 TSHZ3Q63HK5 1081 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 LPIN2Q92539 896 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 XAGE2Q96GT9 111 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 ERO1AQ96HE7 468 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 ZNF512BQ96KM6 892 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 GAS2L1Q99501 681 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 DBNDD2Q9BQY9 259 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 MXD3Q9BW11 206 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 VEZTQ9HBM0 779 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 CD209Q9NNX6 404 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 TLR7Q9NYK1 1049 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
DEPDC4-209ENST00000550587 F8W031 263 aaPredicted RBP7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 GPR37L1O60883 481 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 FRAT2O75474 233 aaPredicted RBP7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 FKBP1AP62942 108 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 MAP3K10Q02779 954 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 UBE4AQ14139 1066 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 CCDC158Q5M9N0 1113 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 CASC1Q6TDU7 716 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 TBC1D9Q6ZT07 1266 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 TXNRD3Q86VQ6 643 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 VPS37DQ86XT2 251 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 ANKRD13AQ8IZ07 590 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 MTMR14Q8NCE2 650 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 HAUS7Q99871 368 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 GRIP2Q9C0E4 1043 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 TRIM17Q9Y577 477 aa7.43□□□□□ -1.22
DEPDC4-209ENST00000550587 WTIPA6NIX2 430 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 DLL1O00548 723 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 TAF5LO75529 589 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 SLC5A1P13866 664 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 IL1R1P14778 569 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 CHMLP26374 656 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 MAP3K11Q16584 847 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 C15orf52Q6ZUT6 534 aaKnown RBP7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 CYP2U1Q7Z449 544 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 RILPL2Q969X0 211 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 HOOK2Q96ED9 719 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 GMCL1Q96IK5 515 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 BOLA2Q9H3K6 86 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 ARHGEF10LQ9HCE6 1279 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 AK9Q5TCS8 1911 aa7.42□□□□□ -1.22
DEPDC4-209ENST00000550587 COL4A1P02462 1669 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 SPEF2Q9C093 1822 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 HIP1O00291 1037 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 MAP4K4O95819 1239 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 UQCRFS1P1P0C7P4 283 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 ADORA1P30542 326 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 SP3Q02447 781 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 CLN3Q13286 438 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 KIF22Q14807 665 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 TTC39AQ5SRH9 613 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 WNK4Q96J92 1243 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 EFCC1Q9HA90 598 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 UPF2Q9HAU5 1272 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 SNRKQ9NRH2 765 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 TMOD2Q9NZR1 351 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 CSADQ9Y600 493 aa7.41□□□□□ -1.22
DEPDC4-209ENST00000550587 TRAK2O60296 914 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 KLRK1P26718 216 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 GTF2A2P52657 109 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 RASA3Q14644 834 aa7.4□□□□□ -1.22
DEPDC4-209ENST00000550587 MFSD14BQ5SR56 506 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms